STRINGSTRING
FBA3 FBA3 GAP3 GAP3 FBA2 FBA2 RPE1 RPE1 RPI1 RPI1 PRK1 PRK1 LCI9 LCI9 PGK1 PGK1 RBCS-1 RBCS-1 Pmp1 Pmp1 CAH3 CAH3 Sbp Sbp LciC LciC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FBA3Uncharacterized protein. (377 aa)
GAP3Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (374 aa)
FBA2Fructose-1,6-bisphosphate aldolase. (370 aa)
RPE1Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (265 aa)
RPI1Ribose-5-phosphate isomerase. (269 aa)
PRK1Phosphoribulokinase. (375 aa)
LCI9Low-CO2-inducible protein. (590 aa)
PGK1Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (462 aa)
RBCS-1Ribulose bisphosphate carboxylase small chain 1, chloroplastic; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (185 aa)
Pmp1Low-CO2-inducible protein. (448 aa)
CAH3Intracellular carbonic anhydrase, alpha type. (310 aa)
SbpSulfate binding protein, component of chloroplast transporter SulP. (467 aa)
LciCLow-CO2 inducible protein LCIC. (443 aa)
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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