STRINGSTRING
lhcb5 lhcb5 PSAK PSAK PGK1 PGK1 ca1 ca1 A0A2K3DLJ9 A0A2K3DLJ9 SEBP1 SEBP1 TRK1 TRK1 FBP1 FBP1 PSAL PSAL PRK1 PRK1 PSBO PSBO PSAF PSAF LHCB4 LHCB4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lhcb5Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (289 aa)
PSAKPhotosystem I reaction center subunit psaK. (113 aa)
PGK1Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (462 aa)
ca1Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (267 aa)
A0A2K3DLJ9Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (508 aa)
SEBP1FBPase domain-containing protein. (385 aa)
TRK1Transketolase. (718 aa)
FBP1Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (415 aa)
PSALPhotosystem I reaction center subunit XI. (196 aa)
PRK1Phosphoribulokinase. (375 aa)
PSBOOxygen-evolving enhancer protein 1 of photosystem II. (291 aa)
PSAFPhotosystem I reaction center subunit III. (227 aa)
LHCB4Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (280 aa)
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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