81 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PBX1	PBX homeobox 1. (430 aa)
	LMX1B	LIM homeobox transcription factor 1 beta. (402 aa)
	MEIS3	Meis homeobox 3. (424 aa)
	PKNOX2	PBX/knotted 1 homeobox 2. (472 aa)
	BARX1	BARX homeobox 1. (254 aa)
	HOXC10	Homeobox C10. (342 aa)
	HOXC9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (263 aa)
	HOXC8	Homeobox C8. (250 aa)
	HOXC6	Homeobox C6. (235 aa)
	HOXC5	Homeobox C5. (222 aa)
	PKNOX1	PBX/knotted 1 homeobox 1. (438 aa)
	IRX5	Iroquois homeobox 5. (483 aa)
	DLX4	Distal-less homeobox 4. (241 aa)
	MAB21L1	Mab-21 like 1. (359 aa)
	MEIS2	Meis homeobox 2. (477 aa)
	EMX2	Empty spiracles homeobox 2. (252 aa)
	PBX4	PBX homeobox 4. (341 aa)
	TBX4	T-box transcription factor 4. (547 aa)
	TSHZ2	Teashirt zinc finger homeobox 2. (1029 aa)
	H0WYR5_OTOGA	BHLH domain-containing protein. (320 aa)
	HOXB6	Homeobox B6. (224 aa)
	HOXB7	Homeobox B7. (219 aa)
	HOXB9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (321 aa)
	NOBOX	NOBOX oogenesis homeobox. (604 aa)
	GSX1	GS homeobox 1. (259 aa)
	HMX2	H6 family homeobox 2. (273 aa)
	DLX1	Distal-less homeobox 1. (256 aa)
	HOXA1	Homeobox A1 isoform a (Predicted). (335 aa)
	HOXA2	Homeobox A2 (Predicted). (372 aa)
	HOXA6	Homeobox A6 (Predicted). (233 aa)
	HOXA11	Homeobox A11 (Predicted). (314 aa)
	IRX2	Iroquois homeobox 2. (443 aa)
	PAX9	Paired box 9. (210 aa)
	H0X9V6_OTOGA	Uncharacterized protein. (150 aa)
	DLX6	Distal-less homeobox 6. (288 aa)
	HOXA9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (272 aa)
	LHX6	LIM homeobox 6. (348 aa)
	HHEX	Hematopoietically expressed homeobox. (271 aa)
	GSX2	GS homeobox 2. (304 aa)
	MEIS1	Meis homeobox 1. (454 aa)
	HOXD12	Homeobox D12. (240 aa)
	HOXD10	Homeobox D10. (340 aa)
	HOXD9	Homeobox D9. (354 aa)
	HOXD8	Homeobox D8. (290 aa)
	HOXD3	Homeobox D3. (432 aa)
	HOXD1	Homeobox D1. (325 aa)
	PBX2	PBX homeobox 2. (430 aa)
	DLX2	Distal-less homeobox 2. (326 aa)
	HOXB1	Homeobox B1. (301 aa)
	H0XHU9_OTOGA	Homeobox A13. (257 aa)
	HOXB3	Homeobox B3. (359 aa)
	LHX8	LIM homeobox 8. (350 aa)
	HOXB5	Homeobox B5. (269 aa)
	HOXB13	Homeobox B13. (284 aa)
	HOXD11	Homeobox D11. (320 aa)
	TSHZ1	Teashirt zinc finger homeobox 1. (1075 aa)
	GBX1	Gastrulation brain homeobox 1. (418 aa)
	TSHZ3	Teashirt zinc finger homeobox 3. (1082 aa)
	MKX	Mohawk homeobox. (282 aa)
	HOXB8	Homeobox B8. (249 aa)
	HOXA4	Homeobox A4 (Predicted). (318 aa)
	HOXC12	Homeobox C12. (280 aa)
	HOXB4	Homeobox B4. (251 aa)
	IRX1	Iroquois homeobox 1. (474 aa)
	MSX2	Msh homeobox 2. (267 aa)
	HOXC11	Homeobox C11. (373 aa)
	IRX4	Iroquois homeobox 4. (520 aa)
	HOXC4	Homeobox C4. (264 aa)
	IRX6	Iroquois homeobox 6. (441 aa)
	HOXD4	Homeobox D4. (260 aa)
	HOXB2	Homeobox B2. (356 aa)
	FIGLA	Folliculogenesis specific bHLH transcription factor. (198 aa)
	HOXA5	Homeobox A5 (Predicted). (270 aa)
	HOXA7	Homeobox A7 (Predicted). (226 aa)
	DLX5	Distal-less homeobox 5. (289 aa)
	HOXD13	Homeobox D13. (333 aa)
	IRX3	Iroquois homeobox 3. (454 aa)
	HOXA10	Homeobox A10 isoform a (Predicted). (413 aa)
	ZNF503	Zinc finger protein 503. (639 aa)
	HOXA3	Homeobox A3 isoform a (Predicted). (443 aa)
	PBX3	PBX homeobox 3. (359 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BARX1	H0X9V6_OTOGA	ENSOGAP00000002984	ENSOGAP00000012373	BARX homeobox 1.	Uncharacterized protein.	0.443
BARX1	LHX6	ENSOGAP00000002984	ENSOGAP00000013518	BARX homeobox 1.	LIM homeobox 6.	0.679
BARX1	LHX8	ENSOGAP00000002984	ENSOGAP00000016108	BARX homeobox 1.	LIM homeobox 8.	0.427
DLX1	DLX2	ENSOGAP00000010643	ENSOGAP00000014613	Distal-less homeobox 1.	Distal-less homeobox 2.	0.868
DLX1	IRX1	ENSOGAP00000010643	ENSOGAP00000018806	Distal-less homeobox 1.	Iroquois homeobox 1.	0.545
DLX1	IRX2	ENSOGAP00000010643	ENSOGAP00000011572	Distal-less homeobox 1.	Iroquois homeobox 2.	0.590
DLX1	IRX3	ENSOGAP00000010643	ENSOGAP00000021943	Distal-less homeobox 1.	Iroquois homeobox 3.	0.453
DLX1	IRX4	ENSOGAP00000010643	ENSOGAP00000020021	Distal-less homeobox 1.	Iroquois homeobox 4.	0.453
DLX1	IRX5	ENSOGAP00000010643	ENSOGAP00000003688	Distal-less homeobox 1.	Iroquois homeobox 5.	0.590
DLX1	IRX6	ENSOGAP00000010643	ENSOGAP00000020585	Distal-less homeobox 1.	Iroquois homeobox 6.	0.453
DLX1	LHX6	ENSOGAP00000010643	ENSOGAP00000013518	Distal-less homeobox 1.	LIM homeobox 6.	0.607
DLX1	MEIS1	ENSOGAP00000010643	ENSOGAP00000013789	Distal-less homeobox 1.	Meis homeobox 1.	0.577
DLX1	MEIS2	ENSOGAP00000010643	ENSOGAP00000005493	Distal-less homeobox 1.	Meis homeobox 2.	0.577
DLX1	MKX	ENSOGAP00000010643	ENSOGAP00000017398	Distal-less homeobox 1.	Mohawk homeobox.	0.442
DLX1	PBX1	ENSOGAP00000010643	ENSOGAP00000000116	Distal-less homeobox 1.	PBX homeobox 1.	0.552
DLX1	PBX2	ENSOGAP00000010643	ENSOGAP00000014595	Distal-less homeobox 1.	PBX homeobox 2.	0.552
DLX1	PBX3	ENSOGAP00000010643	ENSOGAP00000022557	Distal-less homeobox 1.	PBX homeobox 3.	0.552
DLX1	PBX4	ENSOGAP00000010643	ENSOGAP00000006666	Distal-less homeobox 1.	PBX homeobox 4.	0.552
DLX2	DLX1	ENSOGAP00000014613	ENSOGAP00000010643	Distal-less homeobox 2.	Distal-less homeobox 1.	0.868
DLX2	IRX1	ENSOGAP00000014613	ENSOGAP00000018806	Distal-less homeobox 2.	Iroquois homeobox 1.	0.608