40 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC30A9	Solute carrier family 30 member 9. (570 aa)
	BEND4	BEN domain containing 4. (531 aa)
	LARP6	La ribonucleoprotein domain family member 6. (490 aa)
	SLC30A2	Solute carrier family 30 member 2. (383 aa)
	SLC15A2	Solute carrier family 15 member 2. (733 aa)
	MTF1	Metal regulatory transcription factor 1. (752 aa)
	TMEM230	Transmembrane protein 230. (120 aa)
	SLC39A5	Solute carrier family 39 member 5. (540 aa)
	SDR39U1	Short chain dehydrogenase/reductase family 39U member 1. (294 aa)
	SLC30A5	Solute carrier family 30 member 5. (767 aa)
	SLC39A10	Solute carrier family 39 member 10. (833 aa)
	NKX6-3	Homeobox domain-containing protein. (263 aa)
	CCDC88A	Coiled-coil domain containing 88A. (1868 aa)
	CLEC17A	C-type lectin domain containing 17A. (336 aa)
	ECM1	Extracellular matrix protein 1. (562 aa)
	SLC30A8	Solute carrier family 30 member 8. (368 aa)
	SLC35D3	Solute carrier family 35 member D3. (416 aa)
	SLC31A1	Solute carrier family 31 member 1. (180 aa)
	SLC39A6	Solute carrier family 39 member 6. (737 aa)
	SLC39A8	Solute carrier family 39 member 8. (460 aa)
	SLC30A6	Solute carrier family 30 member 6. (461 aa)
	SLC39A14	Solute carrier family 39 member 14. (490 aa)
	SLC30A4	Solute carrier family 30 member 4. (427 aa)
	SLC30A7	Solute carrier family 30 member 7. (389 aa)
	SLC39A9	Solute carrier family 39 member 9. (239 aa)
	ZBTB44	Zinc finger and BTB domain containing 44. (595 aa)
	H0XE89_OTOGA	Uncharacterized protein. (713 aa)
	SLC39A11	Solute carrier family 39 member 11. (345 aa)
	SLC30A10	Uncharacterized protein. (480 aa)
	SLC30A3	Solute carrier family 30 member 3. (388 aa)
	MDH1B	Malate dehydrogenase 1B. (523 aa)
	LOC100957581	Uncharacterized protein. (469 aa)
	SLC39A4	Solute carrier family 39 member 4. (648 aa)
	ZSWIM8	Zinc finger SWIM-type containing 8. (1842 aa)
	SLC30A1	Solute carrier family 30 member 1. (507 aa)
	PPDPFL	Pancreatic progenitor cell differentiation and proliferation factor like. (78 aa)
	SLC39A13	Solute carrier family 39 member 13. (421 aa)
	SLC39A7	Solute carrier family 39 member 7. (468 aa)
	RNF6	Ring finger protein 6. (697 aa)
	SLC39A1	Solute carrier family 39 member 1. (324 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BEND4	SLC30A9	ENSOGAP00000000454	ENSOGAP00000000451	BEN domain containing 4.	Solute carrier family 30 member 9.	0.559
CLEC17A	ECM1	ENSOGAP00000004153	ENSOGAP00000004801	C-type lectin domain containing 17A.	Extracellular matrix protein 1.	0.830
CLEC17A	SLC15A2	ENSOGAP00000004153	ENSOGAP00000000709	C-type lectin domain containing 17A.	Solute carrier family 15 member 2.	0.732
CLEC17A	SLC39A13	ENSOGAP00000004153	ENSOGAP00000021962	C-type lectin domain containing 17A.	Solute carrier family 39 member 13.	0.633
CLEC17A	ZBTB44	ENSOGAP00000004153	ENSOGAP00000014051	C-type lectin domain containing 17A.	Zinc finger and BTB domain containing 44.	0.650
CLEC17A	ZSWIM8	ENSOGAP00000004153	ENSOGAP00000018656	C-type lectin domain containing 17A.	Zinc finger SWIM-type containing 8.	0.680
ECM1	CLEC17A	ENSOGAP00000004801	ENSOGAP00000004153	Extracellular matrix protein 1.	C-type lectin domain containing 17A.	0.830
ECM1	SLC15A2	ENSOGAP00000004801	ENSOGAP00000000709	Extracellular matrix protein 1.	Solute carrier family 15 member 2.	0.828
ECM1	SLC39A13	ENSOGAP00000004801	ENSOGAP00000021962	Extracellular matrix protein 1.	Solute carrier family 39 member 13.	0.830
ECM1	ZBTB44	ENSOGAP00000004801	ENSOGAP00000014051	Extracellular matrix protein 1.	Zinc finger and BTB domain containing 44.	0.832
ECM1	ZSWIM8	ENSOGAP00000004801	ENSOGAP00000018656	Extracellular matrix protein 1.	Zinc finger SWIM-type containing 8.	0.813
H0XE89_OTOGA	SLC39A13	ENSOGAP00000014248	ENSOGAP00000021962	Uncharacterized protein.	Solute carrier family 39 member 13.	0.423
LARP6	RNF6	ENSOGAP00000000468	ENSOGAP00000022293	La ribonucleoprotein domain family member 6.	Ring finger protein 6.	0.538
LARP6	SLC30A3	ENSOGAP00000000468	ENSOGAP00000015135	La ribonucleoprotein domain family member 6.	Solute carrier family 30 member 3.	0.439
LARP6	SLC30A8	ENSOGAP00000000468	ENSOGAP00000005251	La ribonucleoprotein domain family member 6.	Solute carrier family 30 member 8.	0.538
LARP6	SLC35D3	ENSOGAP00000000468	ENSOGAP00000005851	La ribonucleoprotein domain family member 6.	Solute carrier family 35 member D3.	0.538
LOC100957581	SLC30A2	ENSOGAP00000017971	ENSOGAP00000000516	Uncharacterized protein.	Solute carrier family 30 member 2.	0.417
LOC100957581	SLC30A3	ENSOGAP00000017971	ENSOGAP00000015135	Uncharacterized protein.	Solute carrier family 30 member 3.	0.448
LOC100957581	SLC30A4	ENSOGAP00000017971	ENSOGAP00000012275	Uncharacterized protein.	Solute carrier family 30 member 4.	0.441
LOC100957581	SLC30A8	ENSOGAP00000017971	ENSOGAP00000005251	Uncharacterized protein.	Solute carrier family 30 member 8.	0.421