18 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC30A2	Solute carrier family 30 member 2. (383 aa)
	SLC30A5	Solute carrier family 30 member 5. (767 aa)
	SLC39A10	Solute carrier family 39 member 10. (833 aa)
	SLC39A6	Solute carrier family 39 member 6. (737 aa)
	SLC39A8	Solute carrier family 39 member 8. (460 aa)
	SLC30A6	Solute carrier family 30 member 6. (461 aa)
	SLC39A14	Solute carrier family 39 member 14. (490 aa)
	SLC30A4	Solute carrier family 30 member 4. (427 aa)
	SLC30A7	Solute carrier family 30 member 7. (389 aa)
	SLC39A9	Solute carrier family 39 member 9. (239 aa)
	SLC39A11	Solute carrier family 39 member 11. (345 aa)
	SLC30A10	Uncharacterized protein. (480 aa)
	SLC30A3	Solute carrier family 30 member 3. (388 aa)
	LOC100957581	Uncharacterized protein. (469 aa)
	SLC39A4	Solute carrier family 39 member 4. (648 aa)
	SLC30A1	Solute carrier family 30 member 1. (507 aa)
	SLC39A7	Solute carrier family 39 member 7. (468 aa)
	SLC39A1	Solute carrier family 39 member 1. (324 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100957581	SLC30A2	ENSOGAP00000017971	ENSOGAP00000000516	Uncharacterized protein.	Solute carrier family 30 member 2.	0.417
LOC100957581	SLC30A3	ENSOGAP00000017971	ENSOGAP00000015135	Uncharacterized protein.	Solute carrier family 30 member 3.	0.448
LOC100957581	SLC30A4	ENSOGAP00000017971	ENSOGAP00000012275	Uncharacterized protein.	Solute carrier family 30 member 4.	0.441
LOC100957581	SLC39A11	ENSOGAP00000017971	ENSOGAP00000014387	Uncharacterized protein.	Solute carrier family 39 member 11.	0.479
LOC100957581	SLC39A7	ENSOGAP00000017971	ENSOGAP00000022098	Uncharacterized protein.	Solute carrier family 39 member 7.	0.469
SLC30A1	SLC30A4	ENSOGAP00000019127	ENSOGAP00000012275	Solute carrier family 30 member 1.	Solute carrier family 30 member 4.	0.433
SLC30A1	SLC30A6	ENSOGAP00000019127	ENSOGAP00000009132	Solute carrier family 30 member 1.	Solute carrier family 30 member 6.	0.583
SLC30A1	SLC39A1	ENSOGAP00000019127	ENSOGAP00000022524	Solute carrier family 30 member 1.	Solute carrier family 39 member 1.	0.520
SLC30A1	SLC39A10	ENSOGAP00000019127	ENSOGAP00000002758	Solute carrier family 30 member 1.	Solute carrier family 39 member 10.	0.488
SLC30A1	SLC39A11	ENSOGAP00000019127	ENSOGAP00000014387	Solute carrier family 30 member 1.	Solute carrier family 39 member 11.	0.480
SLC30A1	SLC39A14	ENSOGAP00000019127	ENSOGAP00000009453	Solute carrier family 30 member 1.	Solute carrier family 39 member 14.	0.431
SLC30A1	SLC39A4	ENSOGAP00000019127	ENSOGAP00000018204	Solute carrier family 30 member 1.	Solute carrier family 39 member 4.	0.459
SLC30A1	SLC39A6	ENSOGAP00000019127	ENSOGAP00000007328	Solute carrier family 30 member 1.	Solute carrier family 39 member 6.	0.486
SLC30A1	SLC39A7	ENSOGAP00000019127	ENSOGAP00000022098	Solute carrier family 30 member 1.	Solute carrier family 39 member 7.	0.572
SLC30A1	SLC39A8	ENSOGAP00000019127	ENSOGAP00000007474	Solute carrier family 30 member 1.	Solute carrier family 39 member 8.	0.425
SLC30A1	SLC39A9	ENSOGAP00000019127	ENSOGAP00000013529	Solute carrier family 30 member 1.	Solute carrier family 39 member 9.	0.523
SLC30A10	SLC30A2	ENSOGAP00000014679	ENSOGAP00000000516	Uncharacterized protein.	Solute carrier family 30 member 2.	0.413
SLC30A10	SLC30A3	ENSOGAP00000014679	ENSOGAP00000015135	Uncharacterized protein.	Solute carrier family 30 member 3.	0.443
SLC30A10	SLC30A4	ENSOGAP00000014679	ENSOGAP00000012275	Uncharacterized protein.	Solute carrier family 30 member 4.	0.439
SLC30A10	SLC39A11	ENSOGAP00000014679	ENSOGAP00000014387	Uncharacterized protein.	Solute carrier family 39 member 11.	0.479