19 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC39A8	Solute carrier family 39 member 8. (460 aa)
	SLC39A10	Solute carrier family 39 member 10. (833 aa)
	SLC30A8	Solute carrier family 30 member 8. (368 aa)
	SLC39A6	Solute carrier family 39 member 6. (737 aa)
	SLC39A1	Solute carrier family 39 member 1. (324 aa)
	SLC39A13	Solute carrier family 39 member 13. (421 aa)
	SLC39A3	Solute carrier family 39 member 3. (314 aa)
	SLC39A4	Solute carrier family 39 member 4. (648 aa)
	LOC100957581	Uncharacterized protein. (469 aa)
	SLC30A10	Uncharacterized protein. (480 aa)
	SLC30A6	Solute carrier family 30 member 6. (461 aa)
	SLC39A14	Solute carrier family 39 member 14. (490 aa)
	SLC39A11	Solute carrier family 39 member 11. (345 aa)
	SLC30A7	Solute carrier family 30 member 7. (389 aa)
	SLC30A4	Solute carrier family 30 member 4. (427 aa)
	SLC11A2	Solute carrier family 11 member 2. (565 aa)
	SLC30A2	Solute carrier family 30 member 2. (383 aa)
	SLC39A5	Solute carrier family 39 member 5. (540 aa)
	SLC30A5	Solute carrier family 30 member 5. (767 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100957581	SLC30A2	ENSOGAP00000017971	ENSOGAP00000000516	Uncharacterized protein.	Solute carrier family 30 member 2.	0.417
LOC100957581	SLC30A4	ENSOGAP00000017971	ENSOGAP00000012275	Uncharacterized protein.	Solute carrier family 30 member 4.	0.441
LOC100957581	SLC30A8	ENSOGAP00000017971	ENSOGAP00000005251	Uncharacterized protein.	Solute carrier family 30 member 8.	0.421
LOC100957581	SLC39A11	ENSOGAP00000017971	ENSOGAP00000014387	Uncharacterized protein.	Solute carrier family 39 member 11.	0.479
LOC100957581	SLC39A13	ENSOGAP00000017971	ENSOGAP00000021962	Uncharacterized protein.	Solute carrier family 39 member 13.	0.442
SLC11A2	SLC39A1	ENSOGAP00000000191	ENSOGAP00000022524	Solute carrier family 11 member 2.	Solute carrier family 39 member 1.	0.426
SLC11A2	SLC39A14	ENSOGAP00000000191	ENSOGAP00000009453	Solute carrier family 11 member 2.	Solute carrier family 39 member 14.	0.572
SLC30A10	SLC30A2	ENSOGAP00000014679	ENSOGAP00000000516	Uncharacterized protein.	Solute carrier family 30 member 2.	0.413
SLC30A10	SLC30A4	ENSOGAP00000014679	ENSOGAP00000012275	Uncharacterized protein.	Solute carrier family 30 member 4.	0.439
SLC30A10	SLC30A8	ENSOGAP00000014679	ENSOGAP00000005251	Uncharacterized protein.	Solute carrier family 30 member 8.	0.416
SLC30A10	SLC39A11	ENSOGAP00000014679	ENSOGAP00000014387	Uncharacterized protein.	Solute carrier family 39 member 11.	0.479
SLC30A10	SLC39A13	ENSOGAP00000014679	ENSOGAP00000021962	Uncharacterized protein.	Solute carrier family 39 member 13.	0.442
SLC30A2	LOC100957581	ENSOGAP00000000516	ENSOGAP00000017971	Solute carrier family 30 member 2.	Uncharacterized protein.	0.417
SLC30A2	SLC30A10	ENSOGAP00000000516	ENSOGAP00000014679	Solute carrier family 30 member 2.	Uncharacterized protein.	0.413
SLC30A2	SLC30A5	ENSOGAP00000000516	ENSOGAP00000001927	Solute carrier family 30 member 2.	Solute carrier family 30 member 5.	0.430
SLC30A2	SLC30A6	ENSOGAP00000000516	ENSOGAP00000009132	Solute carrier family 30 member 2.	Solute carrier family 30 member 6.	0.579
SLC30A2	SLC30A7	ENSOGAP00000000516	ENSOGAP00000013401	Solute carrier family 30 member 2.	Solute carrier family 30 member 7.	0.455
SLC30A2	SLC30A8	ENSOGAP00000000516	ENSOGAP00000005251	Solute carrier family 30 member 2.	Solute carrier family 30 member 8.	0.421
SLC30A2	SLC39A13	ENSOGAP00000000516	ENSOGAP00000021962	Solute carrier family 30 member 2.	Solute carrier family 39 member 13.	0.581
SLC30A2	SLC39A4	ENSOGAP00000000516	ENSOGAP00000018204	Solute carrier family 30 member 2.	Solute carrier family 39 member 4.	0.566