87 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	COL3A1	Collagen type III alpha 1 chain. (1463 aa)
	COL5A2	Collagen type V alpha 2 chain. (1501 aa)
	COL1A2	Collagen type I alpha 2 chain. (1364 aa)
	RPS18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	COL25A1	Collagen type XXV alpha 1 chain. (498 aa)
	C1QTNF7	C1q and TNF related 7. (296 aa)
	COL6A6	Collagen type VI alpha 6 chain. (2267 aa)
	SFTPD	Surfactant protein D. (375 aa)
	C1QL4	Complement C1q like 4. (238 aa)
	C1QTNF8	C1q and TNF related 8. (253 aa)
	COL4A4	Collagen type IV alpha 4 chain. (1686 aa)
	COL4A1	Collagen type IV alpha 1 chain. (1669 aa)
	COL9A2	Collagen type IX alpha 2 chain. (688 aa)
	COL4A2	Collagen type IV alpha 2 chain. (1662 aa)
	MMP13	Matrix metallopeptidase 13. (474 aa)
	COL24A1	Collagen type XXIV alpha 1 chain. (1672 aa)
	H0X4B3_OTOGA	Uncharacterized protein. (679 aa)
	SAAL1	Serum amyloid A like 1. (474 aa)
	C1QB	Complement C1q B chain. (253 aa)
	C1QC	Complement C1q C chain. (254 aa)
	CCBE1	Collagen and calcium binding EGF domains 1. (405 aa)
	COL22A1	Collagen type XXII alpha 1 chain. (1624 aa)
	EMID1	EMI domain containing 1. (442 aa)
	COL21A1	Collagen type XXI alpha 1 chain. (959 aa)
	MBL2	Mannose binding lectin 2. (250 aa)
	GLDN	Gliomedin. (551 aa)
	COLQ	Collagen like tail subunit of asymmetric acetylcholinesterase. (451 aa)
	COL14A1	Collagen type XIV alpha 1 chain. (1796 aa)
	COL7A1	Uncharacterized protein. (2938 aa)
	C1QTNF6	C1q and TNF related 6. (282 aa)
	WDR33	WD repeat domain 33. (1336 aa)
	FCN3	Ficolin 3. (288 aa)
	MSR1	Macrophage scavenger receptor 1. (446 aa)
	COL4A6	Collagen type IV alpha 6 chain. (1642 aa)
	COL4A5	Collagen type IV alpha 5 chain. (1691 aa)
	COL12A1	Collagen type XII alpha 1 chain. (3125 aa)
	COL6A3	Collagen type VI alpha 3 chain. (3170 aa)
	C1QL2	Complement C1q like 2. (288 aa)
	COL5A3	Collagen type V alpha 3 chain. (1749 aa)
	EDA	Ectodysplasin A; Belongs to the tumor necrosis factor family. (224 aa)
	CD36	CD36 molecule; Belongs to the CD36 family. (472 aa)
	COL27A1	Fibrillar collagen NC1 domain-containing protein. (1858 aa)
	COL23A1	Collagen type XXIII alpha 1 chain. (398 aa)
	COL17A1	Collagen type XVII alpha 1 chain. (1491 aa)
	H0XHK6_OTOGA	C1q domain-containing protein. (212 aa)
	COL1A1	Collagen type I alpha 1 chain. (1463 aa)
	COL6A5	Collagen type VI alpha 5 chain. (2612 aa)
	C1QL3	Complement C1q like 3. (255 aa)
	SCARA3	Scavenger receptor class A member 3. (608 aa)
	H0XP18_OTOGA	Uncharacterized protein. (2164 aa)
	OTOL1	Otolin 1. (471 aa)
	COL8A2	Collagen type VIII alpha 2 chain. (699 aa)
	COL11A2	Collagen type XI alpha 2 chain. (1736 aa)
	EMILIN2	Elastin microfibril interfacer 2. (1091 aa)
	C1QL1	Complement C1q like 1. (258 aa)
	H0XQW4_OTOGA	C1q domain-containing protein. (202 aa)
	COL5A1	Collagen type V alpha 1 chain. (1843 aa)
	C1QTNF2	C1q and TNF related 2. (289 aa)
	H0XU71_OTOGA	Fibrinogen C-terminal domain-containing protein. (329 aa)
	C1QTNF5	C1q and TNF related 5. (249 aa)
	COL28A1	Collagen type XXVIII alpha 1 chain. (1024 aa)
	EMILIN1	Elastin microfibril interfacer 1. (1017 aa)
	LOX	Lysyl oxidase. (414 aa)
	C1QA	Complement C1q A chain. (245 aa)
	C1QTNF3	C1q domain-containing protein. (319 aa)
	COLEC11	Collectin subfamily member 11. (272 aa)
	H0Y080_OTOGA	C1q domain-containing protein. (186 aa)
	COL8A1	Collagen type VIII alpha 1 chain. (744 aa)
	COL6A1	Collagen type VI alpha 1 chain. (1032 aa)
	LUM	Lumican. (339 aa)
	H0Y234_OTOGA	Fibrinogen C-terminal domain-containing protein. (317 aa)
	COL18A1	Collagen type XVIII alpha 1 chain. (1500 aa)
	ADIPOQ	Adiponectin, C1Q and collagen domain containing. (244 aa)
	COLEC10	Collectin subfamily member 10. (277 aa)
	COL11A1	Collagen type XI alpha 1 chain. (1811 aa)
	CTHRC1	Collagen triple helix repeat containing 1. (243 aa)
	COL19A1	Collagen type XIX alpha 1 chain. (1139 aa)
	COL9A1	Collagen type IX alpha 1 chain. (921 aa)
	COLEC12	Collectin subfamily member 12. (722 aa)
	LOC100965642	Adiponectin F1. (332 aa)
	H0WNZ7_OTOGA	C-type lectin domain-containing protein. (349 aa)
	COL15A1	Collagen type XV alpha 1 chain. (1357 aa)
	COL13A1	Collagen type XIII alpha 1 chain. (682 aa)
	COL16A1	Collagen type XVI alpha 1 chain. (1605 aa)
	COL4A3	Collagen type IV alpha 3 chain. (1663 aa)
	COL6A2	Collagen type VI alpha 2 chain. (1024 aa)
	COL2A1	Collagen type II alpha 1 chain. (1469 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADIPOQ	CD36	ENSOGAP00000001265	ENSOGAP00000014740	Adiponectin, C1Q and collagen domain containing.	CD36 molecule; Belongs to the CD36 family.	0.444
ADIPOQ	H0WNZ7_OTOGA	ENSOGAP00000001265	ENSOGAP00000003585	Adiponectin, C1Q and collagen domain containing.	C-type lectin domain-containing protein.	0.603
ADIPOQ	SFTPD	ENSOGAP00000001265	ENSOGAP00000007594	Adiponectin, C1Q and collagen domain containing.	Surfactant protein D.	0.597
C1QA	C1QB	ENSOGAP00000021120	ENSOGAP00000010699	Complement C1q A chain.	Complement C1q B chain.	0.995
C1QA	C1QC	ENSOGAP00000021120	ENSOGAP00000010703	Complement C1q A chain.	Complement C1q C chain.	0.999
C1QA	COLEC10	ENSOGAP00000021120	ENSOGAP00000001815	Complement C1q A chain.	Collectin subfamily member 10.	0.504
C1QA	COLEC11	ENSOGAP00000021120	ENSOGAP00000021541	Complement C1q A chain.	Collectin subfamily member 11.	0.619
C1QA	FCN3	ENSOGAP00000021120	ENSOGAP00000013526	Complement C1q A chain.	Ficolin 3.	0.484
C1QA	H0XU71_OTOGA	ENSOGAP00000021120	ENSOGAP00000019663	Complement C1q A chain.	Fibrinogen C-terminal domain-containing protein.	0.486
C1QA	H0Y234_OTOGA	ENSOGAP00000021120	ENSOGAP00000022427	Complement C1q A chain.	Fibrinogen C-terminal domain-containing protein.	0.486
C1QB	C1QA	ENSOGAP00000010699	ENSOGAP00000021120	Complement C1q B chain.	Complement C1q A chain.	0.995
C1QB	C1QC	ENSOGAP00000010699	ENSOGAP00000010703	Complement C1q B chain.	Complement C1q C chain.	0.996
C1QB	COLEC10	ENSOGAP00000010699	ENSOGAP00000001815	Complement C1q B chain.	Collectin subfamily member 10.	0.530
C1QB	COLEC11	ENSOGAP00000010699	ENSOGAP00000021541	Complement C1q B chain.	Collectin subfamily member 11.	0.503
C1QB	FCN3	ENSOGAP00000010699	ENSOGAP00000013526	Complement C1q B chain.	Ficolin 3.	0.400
C1QB	H0XU71_OTOGA	ENSOGAP00000010699	ENSOGAP00000019663	Complement C1q B chain.	Fibrinogen C-terminal domain-containing protein.	0.406
C1QB	H0Y234_OTOGA	ENSOGAP00000010699	ENSOGAP00000022427	Complement C1q B chain.	Fibrinogen C-terminal domain-containing protein.	0.406
C1QC	C1QA	ENSOGAP00000010703	ENSOGAP00000021120	Complement C1q C chain.	Complement C1q A chain.	0.999
C1QC	C1QB	ENSOGAP00000010703	ENSOGAP00000010699	Complement C1q C chain.	Complement C1q B chain.	0.996
C1QC	C1QL1	ENSOGAP00000010703	ENSOGAP00000018287	Complement C1q C chain.	Complement C1q like 1.	0.624