23 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H0WW89_OTOGA	Uncharacterized protein. (615 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	H0WYM5_OTOGA	Uncharacterized protein. (549 aa)
	PSMB3	Proteasome subunit beta. (210 aa)
	PSMB6	Proteasome subunit beta. (239 aa)
	PSMA4	Proteasome subunit alpha type. (261 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMB1	Proteasome subunit beta. (235 aa)
	PSMA1	Proteasome subunit alpha type. (263 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMB8	Proteasome subunit beta. (276 aa)
	PSMB9	Proteasome subunit beta. (219 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	H0XX75_OTOGA	PROTEASOME_ALPHA_1 domain-containing protein. (231 aa)
	H0XYI8_OTOGA	Proteasome subunit alpha type. (234 aa)
	PSMB11	Proteasome subunit beta. (300 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMA7	Proteasome subunit alpha type. (248 aa)
	PSMB2	Proteasome subunit beta. (202 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	PSMB5	Proteasome subunit beta. (263 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H0WW89_OTOGA	H0WYM5_OTOGA	ENSOGAP00000006633	ENSOGAP00000007620	Uncharacterized protein.	Uncharacterized protein.	0.630
H0WW89_OTOGA	H0XX75_OTOGA	ENSOGAP00000006633	ENSOGAP00000020718	Uncharacterized protein.	PROTEASOME_ALPHA_1 domain-containing protein.	0.957
H0WW89_OTOGA	PSMA1	ENSOGAP00000006633	ENSOGAP00000010400	Uncharacterized protein.	Proteasome subunit alpha type.	0.990
H0WW89_OTOGA	PSMA3	ENSOGAP00000006633	ENSOGAP00000000339	Uncharacterized protein.	Proteasome subunit alpha type.	0.990
H0WW89_OTOGA	PSMA4	ENSOGAP00000006633	ENSOGAP00000009518	Uncharacterized protein.	Proteasome subunit alpha type.	0.989
H0WW89_OTOGA	PSMA5	ENSOGAP00000006633	ENSOGAP00000012152	Uncharacterized protein.	Proteasome subunit alpha type.	0.988
H0WW89_OTOGA	PSMA6	ENSOGAP00000006633	ENSOGAP00000007607	Uncharacterized protein.	Proteasome subunit alpha type.	0.988
H0WW89_OTOGA	PSMA7	ENSOGAP00000006633	ENSOGAP00000000833	Uncharacterized protein.	Proteasome subunit alpha type.	0.957
H0WW89_OTOGA	PSMA8	ENSOGAP00000006633	ENSOGAP00000010060	Uncharacterized protein.	Proteasome subunit alpha type.	0.957
H0WW89_OTOGA	PSMB1	ENSOGAP00000006633	ENSOGAP00000010149	Uncharacterized protein.	Proteasome subunit beta.	0.991
H0WW89_OTOGA	PSMB10	ENSOGAP00000006633	ENSOGAP00000013955	Uncharacterized protein.	Proteasome subunit beta.	0.959
H0WW89_OTOGA	PSMB11	ENSOGAP00000006633	ENSOGAP00000022601	Uncharacterized protein.	Proteasome subunit beta.	0.933
H0WW89_OTOGA	PSMB2	ENSOGAP00000006633	ENSOGAP00000001874	Uncharacterized protein.	Proteasome subunit beta.	0.989
H0WW89_OTOGA	PSMB3	ENSOGAP00000006633	ENSOGAP00000007873	Uncharacterized protein.	Proteasome subunit beta.	0.991
H0WW89_OTOGA	PSMB4	ENSOGAP00000006633	ENSOGAP00000003600	Uncharacterized protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.991
H0WW89_OTOGA	PSMB5	ENSOGAP00000006633	ENSOGAP00000004567	Uncharacterized protein.	Proteasome subunit beta.	0.933
H0WW89_OTOGA	PSMB6	ENSOGAP00000006633	ENSOGAP00000008636	Uncharacterized protein.	Proteasome subunit beta.	0.976
H0WW89_OTOGA	PSMB7	ENSOGAP00000006633	ENSOGAP00000003130	Uncharacterized protein.	Proteasome subunit beta.	0.959
H0WW89_OTOGA	PSMB8	ENSOGAP00000006633	ENSOGAP00000012390	Uncharacterized protein.	Proteasome subunit beta.	0.933
H0WW89_OTOGA	PSMB9	ENSOGAP00000006633	ENSOGAP00000012399	Uncharacterized protein.	Proteasome subunit beta.	0.976