(24 nodes) Epithelial structure maintenance network (Otolemur garnettii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STRAP	Serine/threonine kinase receptor associated protein. (347 aa)
	CXADR	Uncharacterized protein. (366 aa)
	SRF	Serum response factor. (509 aa)
	TFF1	Trefoil factor 1. (88 aa)
	INAVA	Innate immunity activator. (663 aa)
	LDB1	LIM domain binding 1. (356 aa)
	IL17A	Interleukin 17A. (156 aa)
	H0XCB7_OTOGA	EGF-like domain-containing protein. (473 aa)
	NOD2	Nucleotide binding oligomerization domain containing 2. (1027 aa)
	TFF2	Trefoil factor 2. (129 aa)
	TFF3	Trefoil factor 3. (80 aa)
	RBP4	Retinol-binding protein; Retinol-binding protein that mediates retinol transport in blood plasma. (201 aa)
	CRACD	KIAA1211. (1211 aa)
	LSR	Lipolysis stimulated lipoprotein receptor. (584 aa)
	PBLD	Phenazine biosynthesis like protein domain containing. (293 aa)
	ILDR1	Immunoglobulin like domain containing receptor 1. (547 aa)
	CROCC2	Ciliary rootlet coiled-coil, rootletin family member 2. (1522 aa)
	SOX9	SRY-box transcription factor 9. (568 aa)
	LDB2	LIM domain binding 2. (373 aa)
	CROCC	Ciliary rootlet coiled-coil, rootletin. (2008 aa)
	VSIG1	V-set and immunoglobulin domain containing 1. (362 aa)
	MKS1	MKS transition zone complex subunit 1. (559 aa)
	ZNF830	Zinc finger protein 830. (371 aa)
	PIWIL4	Piwi like RNA-mediated gene silencing 4; Belongs to the argonaute family. (858 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CROCC	CROCC2	ENSOGAP00000004576	ENSOGAP00000022595	Ciliary rootlet coiled-coil, rootletin.	Ciliary rootlet coiled-coil, rootletin family member 2.	0.424
CROCC2	CROCC	ENSOGAP00000022595	ENSOGAP00000004576	Ciliary rootlet coiled-coil, rootletin family member 2.	Ciliary rootlet coiled-coil, rootletin.	0.424
H0XCB7_OTOGA	TFF3	ENSOGAP00000013417	ENSOGAP00000013000	EGF-like domain-containing protein.	Trefoil factor 3.	0.406
PBLD	STRAP	ENSOGAP00000000877	ENSOGAP00000011787	Phenazine biosynthesis like protein domain containing.	Serine/threonine kinase receptor associated protein.	0.634
STRAP	PBLD	ENSOGAP00000011787	ENSOGAP00000000877	Serine/threonine kinase receptor associated protein.	Phenazine biosynthesis like protein domain containing.	0.634
TFF3	H0XCB7_OTOGA	ENSOGAP00000013000	ENSOGAP00000013417	Trefoil factor 3.	EGF-like domain-containing protein.	0.406