(21 nodes) Peroxisomal membrane transport network (Otolemur garnettii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABCD1	ATP binding cassette subfamily D member 1. (746 aa)
	PEX19	Uncharacterized protein. (300 aa)
	PEX2	Peroxisomal biogenesis factor 2. (305 aa)
	PEX26	Peroxisomal biogenesis factor 26. (362 aa)
	PEX5	Peroxisomal biogenesis factor 5. (661 aa)
	PEX1	Peroxisomal biogenesis factor 1. (1216 aa)
	PEX14	Peroxisomal biogenesis factor 14. (376 aa)
	PEX16	Peroxisomal membrane protein PEX16. (338 aa)
	PEX6	Peroxisomal biogenesis factor 6. (980 aa)
	ABCD4	ATP binding cassette subfamily D member 4. (606 aa)
	PEX5L	Peroxisomal biogenesis factor 5 like. (595 aa)
	PEX3	Uncharacterized protein. (373 aa)
	FAM185A	Family with sequence similarity 185 member A. (299 aa)
	H0XL55_OTOGA	Uncharacterized protein. (373 aa)
	PEX7	Peroxisomal biogenesis factor 7. (262 aa)
	LONP2	Lon protease homolog; Belongs to the peptidase S16 family. (818 aa)
	PEX12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (359 aa)
	ABCD3	ATP binding cassette subfamily D member 3. (622 aa)
	PEX10	Peroxisomal biogenesis factor 10. (326 aa)
	ABCD2	ATP binding cassette subfamily D member 2. (741 aa)
	PEX13	Peroxisomal biogenesis factor 13. (407 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD1	ABCD2	ENSOGAP00000021438	ENSOGAP00000021042	ATP binding cassette subfamily D member 1.	ATP binding cassette subfamily D member 2.	0.907
ABCD1	ABCD3	ENSOGAP00000021438	ENSOGAP00000008572	ATP binding cassette subfamily D member 1.	ATP binding cassette subfamily D member 3.	0.944
ABCD1	ABCD4	ENSOGAP00000021438	ENSOGAP00000012151	ATP binding cassette subfamily D member 1.	ATP binding cassette subfamily D member 4.	0.898
ABCD1	FAM185A	ENSOGAP00000021438	ENSOGAP00000016287	ATP binding cassette subfamily D member 1.	Family with sequence similarity 185 member A.	0.732
ABCD1	H0XL55_OTOGA	ENSOGAP00000021438	ENSOGAP00000016845	ATP binding cassette subfamily D member 1.	Uncharacterized protein.	0.818
ABCD1	PEX1	ENSOGAP00000021438	ENSOGAP00000009701	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 1.	0.465
ABCD1	PEX12	ENSOGAP00000021438	ENSOGAP00000003570	ATP binding cassette subfamily D member 1.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.724
ABCD1	PEX13	ENSOGAP00000021438	ENSOGAP00000021724	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 13.	0.790
ABCD1	PEX14	ENSOGAP00000021438	ENSOGAP00000010005	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 14.	0.773
ABCD1	PEX16	ENSOGAP00000021438	ENSOGAP00000011251	ATP binding cassette subfamily D member 1.	Peroxisomal membrane protein PEX16.	0.719
ABCD1	PEX19	ENSOGAP00000021438	ENSOGAP00000022115	ATP binding cassette subfamily D member 1.	Uncharacterized protein.	0.908
ABCD1	PEX2	ENSOGAP00000021438	ENSOGAP00000018708	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 2.	0.724
ABCD1	PEX26	ENSOGAP00000021438	ENSOGAP00000017502	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 26.	0.521
ABCD1	PEX3	ENSOGAP00000021438	ENSOGAP00000013184	ATP binding cassette subfamily D member 1.	Uncharacterized protein.	0.818
ABCD1	PEX6	ENSOGAP00000021438	ENSOGAP00000011365	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 6.	0.588
ABCD1	PEX7	ENSOGAP00000021438	ENSOGAP00000000500	ATP binding cassette subfamily D member 1.	Peroxisomal biogenesis factor 7.	0.538
ABCD2	ABCD1	ENSOGAP00000021042	ENSOGAP00000021438	ATP binding cassette subfamily D member 2.	ATP binding cassette subfamily D member 1.	0.907
ABCD2	ABCD3	ENSOGAP00000021042	ENSOGAP00000008572	ATP binding cassette subfamily D member 2.	ATP binding cassette subfamily D member 3.	0.922
ABCD2	ABCD4	ENSOGAP00000021042	ENSOGAP00000012151	ATP binding cassette subfamily D member 2.	ATP binding cassette subfamily D member 4.	0.898
ABCD2	FAM185A	ENSOGAP00000021042	ENSOGAP00000016287	ATP binding cassette subfamily D member 2.	Family with sequence similarity 185 member A.	0.732