31 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H0XLK2_OTOGA	Uncharacterized protein. (247 aa)
	H0XRI3_OTOGA	AAA domain-containing protein; Belongs to the AAA ATPase family. (439 aa)
	PSMD9	PDZ domain-containing protein. (223 aa)
	H0XUT0_OTOGA	AAA domain-containing protein. (392 aa)
	LOC100944801	AAA domain-containing protein; Belongs to the AAA ATPase family. (441 aa)
	PSME1	Proteasome activator subunit 1. (249 aa)
	PSMD14	Proteasome 26S subunit, non-ATPase 14. (308 aa)
	ADRM1	Adhesion regulating molecule 1. (407 aa)
	PSMD4	Proteasome 26S non-ATPase subunit 4 (Predicted). (427 aa)
	PSMD13	Proteasome 26S subunit, non-ATPase 13. (376 aa)
	PSMD8	Proteasome 26S subunit, non-ATPase 8. (351 aa)
	PSMC2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (434 aa)
	PSMD11	Proteasome 26S subunit, non-ATPase 11. (430 aa)
	H0XCY9_OTOGA	AAA domain-containing protein; Belongs to the AAA ATPase family. (466 aa)
	PSMD2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (908 aa)
	PSMD6	Proteasome 26S subunit, non-ATPase 6. (442 aa)
	PSMD7	MPN domain-containing protein. (324 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (953 aa)
	H0X616_OTOGA	Uncharacterized protein. (56 aa)
	PSMD12	Proteasome 26S subunit, non-ATPase 12. (467 aa)
	PSMD3	Proteasome 26S subunit, non-ATPase 3. (536 aa)
	PSMC6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	PSMD5	Uncharacterized protein. (504 aa)
	PSME3	Proteasome activator subunit 3. (254 aa)
	PSMC5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	PSMC4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (418 aa)
	H0WUK3_OTOGA	AAA domain-containing protein; Belongs to the AAA ATPase family. (364 aa)
	PSME2	Uncharacterized protein. (239 aa)
	LOC100963968	Uncharacterized protein. (244 aa)
	H0XI75_OTOGA	JAB_MPN domain-containing protein. (295 aa)
	H0XJC9_OTOGA	Uncharacterized protein. (287 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRM1	H0WUK3_OTOGA	ENSOGAP00000000842	ENSOGAP00000005920	Adhesion regulating molecule 1.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
ADRM1	H0X616_OTOGA	ENSOGAP00000000842	ENSOGAP00000010769	Adhesion regulating molecule 1.	Uncharacterized protein.	0.949
ADRM1	H0XCY9_OTOGA	ENSOGAP00000000842	ENSOGAP00000013690	Adhesion regulating molecule 1.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.989
ADRM1	H0XI75_OTOGA	ENSOGAP00000000842	ENSOGAP00000015815	Adhesion regulating molecule 1.	JAB_MPN domain-containing protein.	0.981
ADRM1	H0XJC9_OTOGA	ENSOGAP00000000842	ENSOGAP00000016219	Adhesion regulating molecule 1.	Uncharacterized protein.	0.969
ADRM1	H0XLK2_OTOGA	ENSOGAP00000000842	ENSOGAP00000016992	Adhesion regulating molecule 1.	Uncharacterized protein.	0.751
ADRM1	H0XRI3_OTOGA	ENSOGAP00000000842	ENSOGAP00000018725	Adhesion regulating molecule 1.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
ADRM1	H0XUT0_OTOGA	ENSOGAP00000000842	ENSOGAP00000019872	Adhesion regulating molecule 1.	AAA domain-containing protein.	0.989
ADRM1	LOC100944801	ENSOGAP00000000842	ENSOGAP00000020287	Adhesion regulating molecule 1.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.992
ADRM1	LOC100963968	ENSOGAP00000000842	ENSOGAP00000014845	Adhesion regulating molecule 1.	Uncharacterized protein.	0.792
ADRM1	PSMC2	ENSOGAP00000000842	ENSOGAP00000004622	Adhesion regulating molecule 1.	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family.	0.999
ADRM1	PSMC4	ENSOGAP00000000842	ENSOGAP00000006127	Adhesion regulating molecule 1.	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family.	0.999
ADRM1	PSMC5	ENSOGAP00000000842	ENSOGAP00000007429	Adhesion regulating molecule 1.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.998
ADRM1	PSMC6	ENSOGAP00000000842	ENSOGAP00000008942	Adhesion regulating molecule 1.	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.	0.999
ADRM1	PSMD1	ENSOGAP00000000842	ENSOGAP00000010917	Adhesion regulating molecule 1.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.999
ADRM1	PSMD11	ENSOGAP00000000842	ENSOGAP00000013842	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 11.	0.999
ADRM1	PSMD12	ENSOGAP00000000842	ENSOGAP00000010235	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 12.	0.997
ADRM1	PSMD13	ENSOGAP00000000842	ENSOGAP00000002891	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 13.	0.999
ADRM1	PSMD14	ENSOGAP00000000842	ENSOGAP00000004405	Adhesion regulating molecule 1.	Proteasome 26S subunit, non-ATPase 14.	0.984
ADRM1	PSMD2	ENSOGAP00000000842	ENSOGAP00000013688	Adhesion regulating molecule 1.	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.	0.998