STRINGSTRING
PDGFB PDGFB FGF10 FGF10 COLEC10 COLEC10 LOC111722762 LOC111722762 VEGFD VEGFD LGALS3 LGALS3 VEGFC VEGFC HGF HGF ALKBH1 ALKBH1 VEGFB VEGFB WNT5A WNT5A PGF PGF NTF3 NTF3 HPS5 HPS5 FGF7 FGF7 GPNMB GPNMB CX3CL1 CX3CL1 H0XIJ7_OTOGA H0XIJ7_OTOGA H0XK75_OTOGA H0XK75_OTOGA MIF MIF SCG2 SCG2 CCL16 CCL16 BMP4 BMP4 FGF2 FGF2 LOC100951212 LOC100951212
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDGFBPlatelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (241 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
COLEC10Collectin subfamily member 10. (277 aa)
LOC111722762Uncharacterized protein. (67 aa)
VEGFDVascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (328 aa)
LGALS3Galectin. (270 aa)
VEGFCVascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. (371 aa)
HGFHepatocyte growth factor; Belongs to the peptidase S1 family. (732 aa)
ALKBH1AlkB homolog 1, histone H2A dioxygenase. (380 aa)
VEGFBVascular endothelial growth factor B; Belongs to the PDGF/VEGF growth factor family. (207 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
PGFPlacental growth factor; Belongs to the PDGF/VEGF growth factor family. (195 aa)
NTF3Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (257 aa)
HPS5Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules. (1022 aa)
FGF7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (194 aa)
GPNMBGlycoprotein nmb. (590 aa)
CX3CL1C-X3-C motif chemokine ligand 1. (384 aa)
H0XIJ7_OTOGAUncharacterized protein. (113 aa)
H0XK75_OTOGAEF-hand domain-containing protein. (105 aa)
MIFMacrophage migration inhibitory factor. (115 aa)
SCG2Secretogranin II. (614 aa)
CCL16C-C motif chemokine ligand 16. (120 aa)
BMP4Bone morphogenetic protein 4 (Predicted). (409 aa)
FGF2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (206 aa)
LOC100951212EF-hand domain-containing protein. (108 aa)
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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