STRINGSTRING
SNRPB2 SNRPB2 SF3B6 SF3B6 SF3B2 SF3B2 H0WTS0_OTOGA H0WTS0_OTOGA SF3B4 SF3B4 SNIP1 SNIP1 BUD13 BUD13 SF3A3 SF3A3 SF3B5 SF3B5 SF3A1 SF3A1 SNRPG SNRPG H0WLK5_OTOGA H0WLK5_OTOGA H0WG26_OTOGA H0WG26_OTOGA H0XX70_OTOGA H0XX70_OTOGA SNRPD2 SNRPD2 SNRPD3 SNRPD3 H0XTQ5_OTOGA H0XTQ5_OTOGA SF3A2 SF3A2 LOC100957263 LOC100957263 SNRPB SNRPB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
SF3B2Splicing factor 3b subunit 2. (893 aa)
H0WTS0_OTOGARRM domain-containing protein. (326 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
SNIP1Smad nuclear interacting protein 1. (390 aa)
BUD13BUD13 homolog. (616 aa)
SF3A3Splicing factor 3a subunit 3. (401 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (73 aa)
H0WLK5_OTOGAUncharacterized protein. (102 aa)
H0WG26_OTOGASF3b1 domain-containing protein. (627 aa)
H0XX70_OTOGAUncharacterized protein. (104 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (148 aa)
H0XTQ5_OTOGAUncharacterized protein. (110 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
LOC100957263Sm domain-containing protein. (86 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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