26 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SF3B5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	ZMAT2	Zinc finger matrin-type 2. (199 aa)
	H0WLK5_OTOGA	Uncharacterized protein. (102 aa)
	PRPF38A	Pre-mRNA processing factor 38A. (312 aa)
	SNRNP200	Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
	CWC27	CWC27 spliceosome associated cyclophilin. (472 aa)
	PRPF6	Pre-mRNA processing factor 6. (930 aa)
	DHX16	DEAH-box helicase 16. (1044 aa)
	SNIP1	Smad nuclear interacting protein 1. (390 aa)
	MFAP1	Microfibrillar-associated protein 1 (Predicted). (439 aa)
	SF3A3	Splicing factor 3a subunit 3. (401 aa)
	SNRPB	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	IK	IK cytokine. (557 aa)
	SNRPB2	Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
	CWC22	CWC22 spliceosome associated protein homolog. (909 aa)
	SNRPG	Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (73 aa)
	WBP4	WW domain binding protein 4. (383 aa)
	SRRM2	Serine/arginine repetitive matrix 2. (2727 aa)
	RNF113A	Uncharacterized protein. (344 aa)
	H0XX70_OTOGA	Uncharacterized protein. (104 aa)
	H0XTQ5_OTOGA	Uncharacterized protein. (110 aa)
	SRRM3	Serine/arginine repetitive matrix 3. (654 aa)
	SF3A2	Splicing factor 3a subunit 2. (464 aa)
	LOC100957263	Sm domain-containing protein. (86 aa)
	LOC100952049	Uncharacterized protein. (341 aa)
	SART1	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (801 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CWC22	CWC27	ENSOGAP00000013694	ENSOGAP00000006192	CWC22 spliceosome associated protein homolog.	CWC27 spliceosome associated cyclophilin.	0.997
CWC22	DHX16	ENSOGAP00000013694	ENSOGAP00000007432	CWC22 spliceosome associated protein homolog.	DEAH-box helicase 16.	0.991
CWC22	H0WLK5_OTOGA	ENSOGAP00000013694	ENSOGAP00000002545	CWC22 spliceosome associated protein homolog.	Uncharacterized protein.	0.836
CWC22	H0XTQ5_OTOGA	ENSOGAP00000013694	ENSOGAP00000019497	CWC22 spliceosome associated protein homolog.	Uncharacterized protein.	0.836
CWC22	H0XX70_OTOGA	ENSOGAP00000013694	ENSOGAP00000020713	CWC22 spliceosome associated protein homolog.	Uncharacterized protein.	0.836
CWC22	IK	ENSOGAP00000013694	ENSOGAP00000012797	CWC22 spliceosome associated protein homolog.	IK cytokine.	0.689
CWC22	LOC100952049	ENSOGAP00000013694	ENSOGAP00000018165	CWC22 spliceosome associated protein homolog.	Uncharacterized protein.	0.976
CWC22	LOC100957263	ENSOGAP00000013694	ENSOGAP00000018581	CWC22 spliceosome associated protein homolog.	Sm domain-containing protein.	0.880
CWC22	MFAP1	ENSOGAP00000013694	ENSOGAP00000009125	CWC22 spliceosome associated protein homolog.	Microfibrillar-associated protein 1 (Predicted).	0.889
CWC22	PRPF38A	ENSOGAP00000013694	ENSOGAP00000004853	CWC22 spliceosome associated protein homolog.	Pre-mRNA processing factor 38A.	0.707
CWC22	PRPF6	ENSOGAP00000013694	ENSOGAP00000006777	CWC22 spliceosome associated protein homolog.	Pre-mRNA processing factor 6.	0.751
CWC22	RNF113A	ENSOGAP00000013694	ENSOGAP00000021498	CWC22 spliceosome associated protein homolog.	Uncharacterized protein.	0.976
CWC22	SART1	ENSOGAP00000013694	ENSOGAP00000014788	CWC22 spliceosome associated protein homolog.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.647
CWC22	SF3A2	ENSOGAP00000013694	ENSOGAP00000019292	CWC22 spliceosome associated protein homolog.	Splicing factor 3a subunit 2.	0.963
CWC22	SF3A3	ENSOGAP00000013694	ENSOGAP00000010837	CWC22 spliceosome associated protein homolog.	Splicing factor 3a subunit 3.	0.963
CWC22	SF3B5	ENSOGAP00000013694	ENSOGAP00000010873	CWC22 spliceosome associated protein homolog.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.944
CWC22	SNIP1	ENSOGAP00000013694	ENSOGAP00000007738	CWC22 spliceosome associated protein homolog.	Smad nuclear interacting protein 1.	0.973
CWC22	SNRNP200	ENSOGAP00000013694	ENSOGAP00000006162	CWC22 spliceosome associated protein homolog.	Small nuclear ribonucleoprotein U5 subunit 200.	0.997
CWC22	SNRPB	ENSOGAP00000013694	ENSOGAP00000014457	CWC22 spliceosome associated protein homolog.	Small nuclear ribonucleoprotein-associated protein.	0.821
CWC22	SNRPB2	ENSOGAP00000013694	ENSOGAP00000013561	CWC22 spliceosome associated protein homolog.	Small nuclear ribonucleoprotein polypeptide B2.	0.874