STRINGSTRING
ZMAT2 ZMAT2 H0WLK5_OTOGA H0WLK5_OTOGA SMU1 SMU1 PRPF38A PRPF38A SF3B2 SF3B2 H0WTS0_OTOGA H0WTS0_OTOGA SNRNP200 SNRNP200 CWC27 CWC27 PRPF6 PRPF6 DHX16 DHX16 SNIP1 SNIP1 UBE2J1 UBE2J1 MFAP1 MFAP1 MTHFSD MTHFSD SF3A3 SF3A3 SF3B5 SF3B5 IK IK SNRPB2 SNRPB2 CWC22 CWC22 SNRPG SNRPG SNRPB SNRPB SART1 SART1 PRPF38B PRPF38B LOC100952049 LOC100952049 LOC100957263 LOC100957263 SF3A2 SF3A2 SRRM3 SRRM3 H0XTQ5_OTOGA H0XTQ5_OTOGA SNRPD2 SNRPD2 H0XX70_OTOGA H0XX70_OTOGA RNF113A RNF113A SRRM2 SRRM2 WBP4 WBP4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ZMAT2Zinc finger matrin-type 2. (199 aa)
H0WLK5_OTOGAUncharacterized protein. (102 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (515 aa)
PRPF38APre-mRNA processing factor 38A. (312 aa)
SF3B2Splicing factor 3b subunit 2. (893 aa)
H0WTS0_OTOGARRM domain-containing protein. (326 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
CWC27CWC27 spliceosome associated cyclophilin. (472 aa)
PRPF6Pre-mRNA processing factor 6. (930 aa)
DHX16DEAH-box helicase 16. (1044 aa)
SNIP1Smad nuclear interacting protein 1. (390 aa)
UBE2J1Ubiquitin conjugating enzyme E2 J1. (311 aa)
MFAP1Microfibrillar-associated protein 1 (Predicted). (439 aa)
MTHFSDMethenyltetrahydrofolate synthetase domain containing. (382 aa)
SF3A3Splicing factor 3a subunit 3. (401 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
IKIK cytokine. (557 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
CWC22CWC22 spliceosome associated protein homolog. (909 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (73 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (801 aa)
PRPF38BUncharacterized protein. (547 aa)
LOC100952049Uncharacterized protein. (341 aa)
LOC100957263Sm domain-containing protein. (86 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
SRRM3Serine/arginine repetitive matrix 3. (654 aa)
H0XTQ5_OTOGAUncharacterized protein. (110 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
H0XX70_OTOGAUncharacterized protein. (104 aa)
RNF113AUncharacterized protein. (344 aa)
SRRM2Serine/arginine repetitive matrix 2. (2727 aa)
WBP4WW domain binding protein 4. (383 aa)
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.