STRINGSTRING
H0XJX1_OTOGA H0XJX1_OTOGA H0WLK5_OTOGA H0WLK5_OTOGA ZNF608 ZNF608 ZMAT2 ZMAT2 SNRPD2 SNRPD2 H0XW89_OTOGA H0XW89_OTOGA H0XU41_OTOGA H0XU41_OTOGA H0XTQ5_OTOGA H0XTQ5_OTOGA SF3A2 SF3A2 H0XSR3_OTOGA H0XSR3_OTOGA H0XSL2_OTOGA H0XSL2_OTOGA LOC100957263 LOC100957263 TXNL4A TXNL4A LSM3-2 LSM3-2 H0XMN3_OTOGA H0XMN3_OTOGA C19orf54 C19orf54 LSM6 LSM6 LSM4 LSM4 H0XX70_OTOGA H0XX70_OTOGA LSM3-3 LSM3-3 LSM6-2 LSM6-2 CD2BP2 CD2BP2 SART1 SART1 SNRPB SNRPB SNRPG SNRPG C3orf49 C3orf49 SNRPB2 SNRPB2 PPIH PPIH LSM5 LSM5 LSM8 LSM8 PDE6C PDE6C SF3A1 SF3A1 H0X7Q6_OTOGA H0X7Q6_OTOGA USP39 USP39 SF3B5 SF3B5 SF3A3 SF3A3 MMP10 MMP10 SNIP1 SNIP1 H0WFU3_OTOGA H0WFU3_OTOGA H0WG26_OTOGA H0WG26_OTOGA SART3 SART3 TMIGD2 TMIGD2 AAR2 AAR2 PRPF4 PRPF4 LSM3 LSM3 SNRPN SNRPN CCDC84 CCDC84 SNRNP200 SNRNP200 H0WTS0_OTOGA H0WTS0_OTOGA SF3B2 SF3B2 TRMT13 TRMT13 HTATSF1 HTATSF1 PRPF3 PRPF3 SNRNP40 SNRNP40 SF3B6 SF3B6 SNRPE SNRPE RBM42 RBM42 SNRPA SNRPA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H0XJX1_OTOGARRM domain-containing protein. (159 aa)
H0WLK5_OTOGAUncharacterized protein. (102 aa)
ZNF608Zinc finger protein 608. (1509 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
H0XW89_OTOGAUncharacterized protein. (360 aa)
H0XU41_OTOGASmall nuclear ribonucleoprotein-associated protein. (214 aa)
H0XTQ5_OTOGAUncharacterized protein. (110 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
H0XSR3_OTOGAUncharacterized protein. (429 aa)
H0XSL2_OTOGASm domain-containing protein. (102 aa)
LOC100957263Sm domain-containing protein. (86 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
H0XMN3_OTOGAWD_REPEATS_REGION domain-containing protein. (331 aa)
C19orf54Chromosome 19 open reading frame 54. (337 aa)
LSM6Sm domain-containing protein. (80 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (146 aa)
H0XX70_OTOGAUncharacterized protein. (104 aa)
LSM3-3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
LSM6-2LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
CD2BP2CD2 cytoplasmic tail binding protein 2. (340 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (801 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (73 aa)
C3orf49Chromosome 3 open reading frame 49. (285 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
PDE6CPhosphodiesterase. (861 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
H0X7Q6_OTOGAU6-snRNA_bdg domain-containing protein. (129 aa)
USP39Ubiquitin specific peptidase 39. (488 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SF3A3Splicing factor 3a subunit 3. (401 aa)
MMP10Matrix metallopeptidase 10. (478 aa)
SNIP1Smad nuclear interacting protein 1. (390 aa)
H0WFU3_OTOGASm domain-containing protein. (102 aa)
H0WG26_OTOGASF3b1 domain-containing protein. (627 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (968 aa)
TMIGD2Transmembrane and immunoglobulin domain containing 2. (284 aa)
AAR2AAR2 splicing factor. (384 aa)
PRPF4Pre-mRNA processing factor 4. (533 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
CCDC84Coiled-coil domain containing 84. (332 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
H0WTS0_OTOGARRM domain-containing protein. (326 aa)
SF3B2Splicing factor 3b subunit 2. (893 aa)
TRMT13tRNA methyltransferase 13 homolog. (496 aa)
HTATSF1HIV-1 Tat specific factor 1. (757 aa)
PRPF3Pre-mRNA processing factor 3. (682 aa)
SNRNP40WD_REPEATS_REGION domain-containing protein. (358 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (76 aa)
RBM42RNA binding motif protein 42. (477 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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