31 items (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CXCL10	C-X-C motif chemokine. (98 aa)
	CXCL12	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family. (80 aa)
	H0XTW2_OTOGA	C-X-C motif chemokine. (129 aa)
	CXCL14	C-X-C motif chemokine ligand 14. (110 aa)
	H0XV88_OTOGA	C-C motif chemokine. (118 aa)
	CCL16	C-C motif chemokine ligand 16. (120 aa)
	H0XVZ1_OTOGA	C-X-C motif chemokine. (116 aa)
	CCL27	C-C motif chemokine ligand 27. (111 aa)
	H0WIC4_OTOGA	C-C motif chemokine. (119 aa)
	H0WLD5_OTOGA	C-X-C motif chemokine. (111 aa)
	CCL24	C-C motif chemokine ligand 24. (117 aa)
	H0WNP4_OTOGA	SCY domain-containing protein. (97 aa)
	CCL13	C-C motif chemokine. (97 aa)
	CCL11	C-C motif chemokine. (97 aa)
	CCL7	C-C motif chemokine. (99 aa)
	CCL14	C-C motif chemokine ligand 14. (96 aa)
	CCL19	C-C motif chemokine. (104 aa)
	CXCL6	C-X-C motif chemokine. (117 aa)
	CCL17	C-C motif chemokine. (102 aa)
	CCL21	C-C motif chemokine ligand 21. (134 aa)
	CCL28	C-C motif chemokine. (104 aa)
	H0X386_OTOGA	C-X-C motif chemokine. (103 aa)
	H0X388_OTOGA	SCY domain-containing protein. (123 aa)
	H0X439_OTOGA	SCY domain-containing protein. (115 aa)
	CXCL9	C-X-C motif chemokine. (131 aa)
	CCL5	C-C motif chemokine. (91 aa)
	LOC100955463	C-C motif chemokine. (92 aa)
	CXCL8	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (99 aa)
	CX3CL1	C-X3-C motif chemokine ligand 1. (384 aa)
	CCL26	C-C motif chemokine. (94 aa)
	CCL8	C-C motif chemokine. (98 aa)

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCL11	CCL13	ENSOGAP00000003462	ENSOGAP00000003460	C-C motif chemokine.	C-C motif chemokine.	0.993
CCL11	CCL14	ENSOGAP00000003462	ENSOGAP00000021448	C-C motif chemokine.	C-C motif chemokine ligand 14.	0.985
CCL11	CCL17	ENSOGAP00000003462	ENSOGAP00000006245	C-C motif chemokine.	C-C motif chemokine.	0.542
CCL11	CCL24	ENSOGAP00000003462	ENSOGAP00000002738	C-C motif chemokine.	C-C motif chemokine ligand 24.	0.846
CCL11	CCL26	ENSOGAP00000003462	ENSOGAP00000016408	C-C motif chemokine.	C-C motif chemokine.	0.994
CCL11	CCL27	ENSOGAP00000003462	ENSOGAP00000020910	C-C motif chemokine.	C-C motif chemokine ligand 27.	0.994
CCL11	CCL28	ENSOGAP00000003462	ENSOGAP00000008160	C-C motif chemokine.	C-C motif chemokine.	0.992
CCL11	CCL5	ENSOGAP00000003462	ENSOGAP00000010493	C-C motif chemokine.	C-C motif chemokine.	0.993
CCL11	CCL7	ENSOGAP00000003462	ENSOGAP00000003463	C-C motif chemokine.	C-C motif chemokine.	0.844
CCL11	CX3CL1	ENSOGAP00000003462	ENSOGAP00000015455	C-C motif chemokine.	C-X3-C motif chemokine ligand 1.	0.680
CCL11	CXCL10	ENSOGAP00000003462	ENSOGAP00000022139	C-C motif chemokine.	C-X-C motif chemokine.	0.924
CCL11	CXCL12	ENSOGAP00000003462	ENSOGAP00000019401	C-C motif chemokine.	C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.	0.983
CCL11	CXCL14	ENSOGAP00000003462	ENSOGAP00000022515	C-C motif chemokine.	C-X-C motif chemokine ligand 14.	0.963
CCL11	CXCL6	ENSOGAP00000003462	ENSOGAP00000006141	C-C motif chemokine.	C-X-C motif chemokine.	0.941
CCL11	CXCL9	ENSOGAP00000003462	ENSOGAP00000010404	C-C motif chemokine.	C-X-C motif chemokine.	0.984
CCL11	H0WIC4_OTOGA	ENSOGAP00000003462	ENSOGAP00000001171	C-C motif chemokine.	C-C motif chemokine.	0.911
CCL11	H0WLD5_OTOGA	ENSOGAP00000003462	ENSOGAP00000002449	C-C motif chemokine.	C-X-C motif chemokine.	0.823
CCL11	H0X386_OTOGA	ENSOGAP00000003462	ENSOGAP00000009568	C-C motif chemokine.	C-X-C motif chemokine.	0.823
CCL11	H0X388_OTOGA	ENSOGAP00000003462	ENSOGAP00000009570	C-C motif chemokine.	SCY domain-containing protein.	0.880
CCL11	H0X439_OTOGA	ENSOGAP00000003462	ENSOGAP00000009937	C-C motif chemokine.	SCY domain-containing protein.	0.919