STRINGSTRING
H0XWA2_OTOGA H0XWA2_OTOGA H0WFU3_OTOGA H0WFU3_OTOGA WDR25 WDR25 RBM8A RBM8A H0WG26_OTOGA H0WG26_OTOGA THOC2 THOC2 THOC1 THOC1 SRSF3 SRSF3 SMNDC1 SMNDC1 DHX35 DHX35 DQX1 DQX1 R3HCC1 R3HCC1 DDX17 DDX17 H0WIW3_OTOGA H0WIW3_OTOGA YTHDC2 YTHDC2 L3MBTL3 L3MBTL3 TMIGD2 TMIGD2 DDX50 DDX50 H0WJG8_OTOGA H0WJG8_OTOGA ZMAT2 ZMAT2 DHX34 DHX34 SLC30A5 SLC30A5 HNRNPDL HNRNPDL LSM10 LSM10 H0WLK5_OTOGA H0WLK5_OTOGA SNRPA SNRPA AGGF1 AGGF1 THOC3 THOC3 PPIE PPIE SRSF9 SRSF9 SNU13 SNU13 HNRNPD HNRNPD RBM6 RBM6 SNRPE SNRPE U2SURP U2SURP SF3B6 SF3B6 GPATCH2 GPATCH2 SNRNP40 SNRNP40 HSPA14 HSPA14 TMEM59L TMEM59L NCBP2 NCBP2 PRPF40B PRPF40B H0WRF0_OTOGA H0WRF0_OTOGA PRPF3 PRPF3 TRA2B TRA2B PRPF38A PRPF38A ZNF804B ZNF804B SF3B2 SF3B2 CHERP CHERP ZNF804A ZNF804A L3MBTL4 L3MBTL4 PUF60 PUF60 SF3B4 SF3B4 MTMR11 MTMR11 SRSF12 SRSF12 RALYL RALYL YBX1 YBX1 MAPRE3 MAPRE3 SAFB2 SAFB2 DDX42 DDX42 SNRNP200 SNRNP200 CWC27 CWC27 PRPF31 PRPF31 U2AF2 U2AF2 PRPF18 PRPF18 SNRPN SNRPN HNRNPK HNRNPK EIF4A3 EIF4A3 TAPT1 TAPT1 BCAS2 BCAS2 PRPF6 PRPF6 H0WWM8_OTOGA H0WWM8_OTOGA TADA1 TADA1 LSM3 LSM3 DAW1 DAW1 PRPF4 PRPF4 SNRPD1 SNRPD1 RBMX RBMX BTBD9 BTBD9 CDC5L CDC5L POLDIP3 POLDIP3 DHX16 DHX16 H0WYE8_OTOGA H0WYE8_OTOGA H0WYE9_OTOGA H0WYE9_OTOGA RBM10 RBM10 CDC40 CDC40 TXNL4B TXNL4B DHX38 DHX38 LYRM7 LYRM7 DDX59 DDX59 SOX30 SOX30 RBM41 RBM41 GPATCH2L GPATCH2L PQBP1 PQBP1 TRA2A TRA2A SYF2 SYF2 BTBD16 BTBD16 SRSF7 SRSF7 HSPA12A HSPA12A SLC30A6 SLC30A6 DDX39A DDX39A DHX8 DHX8 TIA1 TIA1 BUD31 BUD31 DHX32 DHX32 MYEF2 MYEF2 RBM22 RBM22 WDR53 WDR53 GPR149 GPR149 PPIL1 PPIL1 PLRG1 PLRG1 TIAL1 TIAL1 CTNNBL1 CTNNBL1 CRNKL1 CRNKL1 H0X5B7_OTOGA H0X5B7_OTOGA UBAP2L UBAP2L ZC3H13 ZC3H13 SF3A3 SF3A3 SF3B5 SF3B5 USP39 USP39 SLU7 SLU7 ALYREF ALYREF PDCL2 PDCL2 H0X760_OTOGA H0X760_OTOGA ACIN1 ACIN1 H0X7Q6_OTOGA H0X7Q6_OTOGA EFTUD2 EFTUD2 SF3A1 SF3A1 UBAP2 UBAP2 R3HCC1L R3HCC1L CZIB CZIB MAGOH MAGOH LSM8 LSM8 NCBP1 NCBP1 LSM5 LSM5 HNRNPU HNRNPU HSPA1L HSPA1L H0XAZ5_OTOGA H0XAZ5_OTOGA PRPF40A PRPF40A SRSF6 SRSF6 H0XBA2_OTOGA H0XBA2_OTOGA PPIH PPIH H0XC89_OTOGA H0XC89_OTOGA SLC30A7 SLC30A7 RBM25 RBM25 SRSF5 SRSF5 PDCL3 PDCL3 SNRPB2 SNRPB2 SNRPG SNRPG SRSF10 SRSF10 SRSF4 SRSF4 RBM4 RBM4 RBM17 RBM17 MAPRE2 MAPRE2 AQR AQR SF3B3 SF3B3 SNRPB SNRPB ZNF318 ZNF318 UHRF1BP1 UHRF1BP1 ZMAT5 ZMAT5 H0XFH8_OTOGA H0XFH8_OTOGA SART1 SART1 LDLRAD1 LDLRAD1 TMEM59 TMEM59 PRPF19 PRPF19 CCDC12 CCDC12 DDX23 DDX23 SNRPA1 SNRPA1 IGF2BP3 IGF2BP3 H0XH07_OTOGA H0XH07_OTOGA HNRNPAB HNRNPAB H0XI08_OTOGA H0XI08_OTOGA H0XI54_OTOGA H0XI54_OTOGA H0XIA1_OTOGA H0XIA1_OTOGA TOPORS TOPORS H0XIG1_OTOGA H0XIG1_OTOGA LSM4 LSM4 LSM6 LSM6 RALY RALY H0XJ05_OTOGA H0XJ05_OTOGA WBP11 WBP11 SAFB SAFB H0XJM1_OTOGA H0XJM1_OTOGA SNRPD2 SNRPD2 LOC100952023 LOC100952023 H0XJX1_OTOGA H0XJX1_OTOGA H0XJY8_OTOGA H0XJY8_OTOGA HNRNPM HNRNPM H0XK74_OTOGA H0XK74_OTOGA H0XKB9_OTOGA H0XKB9_OTOGA H0XKC6_OTOGA H0XKC6_OTOGA CWC15 CWC15 H0XL40_OTOGA H0XL40_OTOGA RBM38 RBM38 C19orf54 C19orf54 H0XLJ4_OTOGA H0XLJ4_OTOGA RBM5 RBM5 H0XLZ3_OTOGA H0XLZ3_OTOGA H0XM46_OTOGA H0XM46_OTOGA H0XM59_OTOGA H0XM59_OTOGA H0XM82_OTOGA H0XM82_OTOGA H0XMB9_OTOGA H0XMB9_OTOGA H0XME6_OTOGA H0XME6_OTOGA H0XMI7_OTOGA H0XMI7_OTOGA H0XMN3_OTOGA H0XMN3_OTOGA H0XMQ4_OTOGA H0XMQ4_OTOGA H0XMT1_OTOGA H0XMT1_OTOGA PRPF38B PRPF38B H0XNG3_OTOGA H0XNG3_OTOGA H0XNG5_OTOGA H0XNG5_OTOGA H0XNI6_OTOGA H0XNI6_OTOGA H0XNJ3_OTOGA H0XNJ3_OTOGA H0XNQ4_OTOGA H0XNQ4_OTOGA H0XNR5_OTOGA H0XNR5_OTOGA HNRNPA0 HNRNPA0 H0XP73_OTOGA H0XP73_OTOGA H0XPI6_OTOGA H0XPI6_OTOGA MAPRE1 MAPRE1 H0XQ39_OTOGA H0XQ39_OTOGA ENSOGAP00000022545 ENSOGAP00000022545 XAB2 XAB2 LSM6-2 LSM6-2 RBMXL2 RBMXL2 H0Y1K1_OTOGA H0Y1K1_OTOGA SNRPC-3 SNRPC-3 HSPA13 HSPA13 H0Y1C6_OTOGA H0Y1C6_OTOGA H0Y150_OTOGA H0Y150_OTOGA H0Y0R1_OTOGA H0Y0R1_OTOGA H0Y000_OTOGA H0Y000_OTOGA H0XZL8_OTOGA H0XZL8_OTOGA H0XZC7_OTOGA H0XZC7_OTOGA H0XZ80_OTOGA H0XZ80_OTOGA LOC100967121 LOC100967121 H0XYH4_OTOGA H0XYH4_OTOGA H0XYD5_OTOGA H0XYD5_OTOGA H0XY77_OTOGA H0XY77_OTOGA ZC2HC1C ZC2HC1C LSM3-3 LSM3-3 RBM14 RBM14 SNW1 SNW1 TCERG1 TCERG1 SNRPC-2 SNRPC-2 H0XXF8_OTOGA H0XXF8_OTOGA SNRPC SNRPC H0XXD5_OTOGA H0XXD5_OTOGA HSPA2 HSPA2 H0XX70_OTOGA H0XX70_OTOGA SRSF1 SRSF1 H0XX05_OTOGA H0XX05_OTOGA RBM24 RBM24 TXNL4A TXNL4A H0XWX1_OTOGA H0XWX1_OTOGA H0XWW2_OTOGA H0XWW2_OTOGA LOC100953940 LOC100953940 NAA38 NAA38 LSM3-2 LSM3-2 WAC WAC LOC100957263 LOC100957263 DDX51 DDX51 BTBD19 BTBD19 RP9 RP9 H0XS21_OTOGA H0XS21_OTOGA H0XS57_OTOGA H0XS57_OTOGA H0XS58_OTOGA H0XS58_OTOGA H0XS69_OTOGA H0XS69_OTOGA H0XSL2_OTOGA H0XSL2_OTOGA H0XSM7_OTOGA H0XSM7_OTOGA H0XSR3_OTOGA H0XSR3_OTOGA H0XSS8_OTOGA H0XSS8_OTOGA H0XT46_OTOGA H0XT46_OTOGA SF3A2 SF3A2 RNPC3 RNPC3 H0XTP5_OTOGA H0XTP5_OTOGA H0XTQ5_OTOGA H0XTQ5_OTOGA H0XTV6_OTOGA H0XTV6_OTOGA H0XU41_OTOGA H0XU41_OTOGA H0XU79_OTOGA H0XU79_OTOGA H0XUE9_OTOGA H0XUE9_OTOGA H0XUH3_OTOGA H0XUH3_OTOGA H0XUH9_OTOGA H0XUH9_OTOGA SNRNP70 SNRNP70 H0XUN3_OTOGA H0XUN3_OTOGA H0XUN5_OTOGA H0XUN5_OTOGA SRSF2 SRSF2 SNRPD3 SNRPD3 H0XVW6_OTOGA H0XVW6_OTOGA H0XW07_OTOGA H0XW07_OTOGA HSPA12B HSPA12B H0XW28_OTOGA H0XW28_OTOGA H0XW89_OTOGA H0XW89_OTOGA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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H0XWA2_OTOGARRM domain-containing protein. (148 aa)
H0WFU3_OTOGASm domain-containing protein. (102 aa)
WDR25WD repeat domain 25. (534 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (177 aa)
H0WG26_OTOGASF3b1 domain-containing protein. (627 aa)
THOC2THO complex 2. (1593 aa)
THOC1THO complex 1. (655 aa)
SRSF3Serine and arginine rich splicing factor 3. (164 aa)
SMNDC1Survival motor neuron domain containing 1. (238 aa)
DHX35DEAH-box helicase 35. (679 aa)
DQX1DEAQ-box RNA dependent ATPase 1. (719 aa)
R3HCC1R3H domain and coiled-coil containing 1. (475 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (652 aa)
H0WIW3_OTOGAC3H1-type domain-containing protein. (1101 aa)
YTHDC2YTH domain containing 2. (1436 aa)
L3MBTL3L3MBTL histone methyl-lysine binding protein 3. (780 aa)
TMIGD2Transmembrane and immunoglobulin domain containing 2. (284 aa)
DDX50DExD-box helicase 50. (737 aa)
H0WJG8_OTOGAUncharacterized protein. (842 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
DHX34DExH-box helicase 34. (1147 aa)
SLC30A5Solute carrier family 30 member 5. (767 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D like. (418 aa)
LSM10LSM10, U7 small nuclear RNA associated. (123 aa)
H0WLK5_OTOGAUncharacterized protein. (102 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
AGGF1Uncharacterized protein. (715 aa)
THOC3THO complex 3. (351 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (304 aa)
SRSF9Serine and arginine rich splicing factor 9. (222 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (355 aa)
RBM6RNA binding motif protein 6. (1122 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (76 aa)
U2SURPU2 snRNP associated SURP domain containing. (1027 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
GPATCH2G-patch domain containing 2. (528 aa)
SNRNP40WD_REPEATS_REGION domain-containing protein. (358 aa)
HSPA14Heat shock protein family A (Hsp70) member 14; Belongs to the heat shock protein 70 family. (511 aa)
TMEM59LTransmembrane protein 59 like. (343 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
PRPF40BPre-mRNA processing factor 40 homolog B. (873 aa)
H0WRF0_OTOGAUncharacterized protein. (285 aa)
PRPF3Pre-mRNA processing factor 3. (682 aa)
TRA2BTransformer 2 beta homolog. (293 aa)
PRPF38APre-mRNA processing factor 38A. (312 aa)
ZNF804BZinc finger protein 804B. (1256 aa)
SF3B2Splicing factor 3b subunit 2. (893 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (927 aa)
ZNF804AZinc finger protein 804A. (1115 aa)
L3MBTL4L3MBTL histone methyl-lysine binding protein 4. (623 aa)
PUF60Poly(U) binding splicing factor 60. (559 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
MTMR11Myotubularin related protein 11. (709 aa)
SRSF12Serine and arginine rich splicing factor 12. (240 aa)
RALYLRALY RNA binding protein like. (206 aa)
YBX1CSD_1 domain-containing protein. (247 aa)
MAPRE3Microtubule associated protein RP/EB family member 3. (282 aa)
SAFB2Scaffold attachment factor B2. (940 aa)
DDX42DEAD-box helicase 42. (936 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
CWC27CWC27 spliceosome associated cyclophilin. (472 aa)
PRPF31PRP31 pre-mRNA processing factor 31 homolog (Predicted). (307 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
PRPF18SFM domain-containing protein. (342 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K. (440 aa)
EIF4A3Uncharacterized protein; Belongs to the DEAD box helicase family. (411 aa)
TAPT1Transmembrane anterior posterior transformation 1. (501 aa)
BCAS2BCAS2 pre-mRNA processing factor. (225 aa)
PRPF6Pre-mRNA processing factor 6. (930 aa)
H0WWM8_OTOGAUncharacterized protein. (794 aa)
TADA1Transcriptional adaptor 1. (335 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
DAW1Dynein assembly factor with WD repeats 1. (417 aa)
PRPF4Pre-mRNA processing factor 4. (533 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
RBMXRRM domain-containing protein. (500 aa)
BTBD9BTB domain containing 9. (612 aa)
CDC5LCell division cycle 5 like. (803 aa)
POLDIP3DNA polymerase delta interacting protein 3. (421 aa)
DHX16DEAH-box helicase 16. (1044 aa)
H0WYE8_OTOGABTB domain-containing protein. (527 aa)
H0WYE9_OTOGASNRNP27 domain-containing protein. (157 aa)
RBM10RNA binding motif protein 10. (995 aa)
CDC40Cell division cycle 40. (579 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
DHX38DEAH-box helicase 38. (1229 aa)
LYRM7LYR motif containing 7; Belongs to the complex I LYR family. (104 aa)
DDX59DEAD-box helicase 59. (607 aa)
SOX30SRY-box transcription factor 30. (768 aa)
RBM41RNA binding motif protein 41. (412 aa)
GPATCH2LG-patch domain containing 2 like. (482 aa)
PQBP1Polyglutamine binding protein 1. (265 aa)
TRA2ATransformer 2 alpha homolog. (283 aa)
SYF2SYF2 pre-mRNA splicing factor. (244 aa)
BTBD16BTB domain containing 16. (511 aa)
SRSF7Serine and arginine rich splicing factor 7. (242 aa)
HSPA12AHeat shock protein family A (Hsp70) member 12A. (625 aa)
SLC30A6Solute carrier family 30 member 6. (461 aa)
DDX39AUncharacterized protein. (427 aa)
DHX8DEAH-box helicase 8. (1220 aa)
TIA1TIA1 cytotoxic granule associated RNA binding protein. (391 aa)
BUD31BUD31 homolog. (144 aa)
DHX32DEAH-box helicase 32 (putative). (744 aa)
MYEF2Myelin expression factor 2. (601 aa)
RBM22RNA binding motif protein 22. (421 aa)
WDR53WD repeat domain 53. (357 aa)
GPR149G protein-coupled receptor 149. (730 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
PLRG1Pleiotropic regulator 1. (516 aa)
TIAL1TIA1 cytotoxic granule associated RNA binding protein like 1. (392 aa)
CTNNBL1Catenin beta like 1. (563 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (687 aa)
H0X5B7_OTOGAUncharacterized protein. (1011 aa)
UBAP2LUbiquitin associated protein 2 like. (1034 aa)
ZC3H13Zinc finger CCCH-type containing 13. (1653 aa)
SF3A3Splicing factor 3a subunit 3. (401 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
USP39Ubiquitin specific peptidase 39. (488 aa)
SLU7SLU7 homolog, splicing factor. (586 aa)
ALYREFAly/REF export factor. (233 aa)
PDCL2Phosducin like 2. (238 aa)
H0X760_OTOGARRM domain-containing protein. (295 aa)
ACIN1Apoptotic chromatin condensation inducer 1. (1340 aa)
H0X7Q6_OTOGAU6-snRNA_bdg domain-containing protein. (129 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (969 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
UBAP2Ubiquitin associated protein 2. (1028 aa)
R3HCC1LR3H domain and coiled-coil containing 1 like. (778 aa)
CZIBCXXC motif containing zinc binding protein. (159 aa)
MAGOHMago homolog, exon junction complex subunit. (146 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
NCBP1Nuclear cap binding protein subunit 1. (792 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (804 aa)
HSPA1LHeat shock protein family A (Hsp70) member 1 like; Belongs to the heat shock protein 70 family. (641 aa)
H0XAZ5_OTOGASm domain-containing protein. (53 aa)
PRPF40APre-mRNA processing factor 40 homolog A. (938 aa)
SRSF6Serine and arginine rich splicing factor 6. (345 aa)
H0XBA2_OTOGAUncharacterized protein. (839 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
H0XC89_OTOGACSD_1 domain-containing protein. (317 aa)
SLC30A7Solute carrier family 30 member 7. (389 aa)
RBM25RNA binding motif protein 25. (827 aa)
SRSF5Serine and arginine rich splicing factor 5. (270 aa)
PDCL3Phosducin like 3. (238 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (73 aa)
SRSF10Serine and arginine rich splicing factor 10. (223 aa)
SRSF4Serine and arginine rich splicing factor 4. (493 aa)
RBM4RNA binding motif protein 4. (365 aa)
RBM17RNA binding motif protein 17. (405 aa)
MAPRE2Microtubule associated protein RP/EB family member 2. (247 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1500 aa)
SF3B3Splicing factor 3b subunit 3. (1220 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
ZNF318Zinc finger protein 318. (2250 aa)
UHRF1BP1UHRF1 binding protein 1. (1440 aa)
ZMAT5Zinc finger matrin-type 5. (170 aa)
H0XFH8_OTOGAUncharacterized protein. (225 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (801 aa)
LDLRAD1Low density lipoprotein receptor class A domain containing 1. (212 aa)
TMEM59Transmembrane protein 59. (322 aa)
PRPF19Pre-mRNA processing factor 19. (506 aa)
CCDC12Coiled-coil domain containing 12. (112 aa)
DDX23DEAD-box helicase 23. (820 aa)
SNRPA1LRRcap domain-containing protein. (255 aa)
IGF2BP3Insulin like growth factor 2 mRNA binding protein 3. (579 aa)
H0XH07_OTOGARRM domain-containing protein. (256 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (332 aa)
H0XI08_OTOGARRM domain-containing protein. (112 aa)
H0XI54_OTOGAUncharacterized protein. (322 aa)
H0XIA1_OTOGAUncharacterized protein. (792 aa)
TOPORSTOP1 binding arginine/serine rich protein. (1030 aa)
H0XIG1_OTOGACSD domain-containing protein. (295 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (146 aa)
LSM6Sm domain-containing protein. (80 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (312 aa)
H0XJ05_OTOGAUncharacterized protein. (288 aa)
WBP11Uncharacterized protein. (644 aa)
SAFBScaffold attachment factor B. (908 aa)
H0XJM1_OTOGACSD_1 domain-containing protein. (275 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
LOC100952023Uncharacterized protein. (1031 aa)
H0XJX1_OTOGARRM domain-containing protein. (159 aa)
H0XJY8_OTOGAUncharacterized protein. (345 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (704 aa)
H0XK74_OTOGAUncharacterized protein. (198 aa)
H0XKB9_OTOGAUncharacterized protein. (354 aa)
H0XKC6_OTOGAUncharacterized protein. (427 aa)
CWC15CWC15 spliceosome associated protein homolog. (231 aa)
H0XL40_OTOGACSD_1 domain-containing protein. (264 aa)
RBM38RNA binding motif protein 38. (240 aa)
C19orf54Chromosome 19 open reading frame 54. (337 aa)
H0XLJ4_OTOGAUncharacterized protein. (389 aa)
RBM5RNA binding motif protein 5. (760 aa)
H0XLZ3_OTOGAUncharacterized protein. (382 aa)
H0XM46_OTOGAUncharacterized protein. (376 aa)
H0XM59_OTOGACSD_1 domain-containing protein. (212 aa)
H0XM82_OTOGAUncharacterized protein. (437 aa)
H0XMB9_OTOGARRM domain-containing protein. (416 aa)
H0XME6_OTOGAUncharacterized protein. (486 aa)
H0XMI7_OTOGARRM domain-containing protein. (211 aa)
H0XMN3_OTOGAWD_REPEATS_REGION domain-containing protein. (331 aa)
H0XMQ4_OTOGAUncharacterized protein. (259 aa)
H0XMT1_OTOGAUncharacterized protein. (307 aa)
PRPF38BUncharacterized protein. (547 aa)
H0XNG3_OTOGACSP domain-containing protein. (307 aa)
H0XNG5_OTOGACSD_1 domain-containing protein. (220 aa)
H0XNI6_OTOGAUncharacterized protein. (250 aa)
H0XNJ3_OTOGARRM domain-containing protein. (166 aa)
H0XNQ4_OTOGAUncharacterized protein. (639 aa)
H0XNR5_OTOGAUncharacterized protein; Belongs to the heat shock protein 70 family. (643 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (237 aa)
H0XP73_OTOGAUncharacterized protein. (218 aa)
H0XPI6_OTOGACSP domain-containing protein. (308 aa)
MAPRE1Uncharacterized protein. (268 aa)
H0XQ39_OTOGABTB domain-containing protein. (445 aa)
ENSOGAP00000022545annotation not available (643 aa)
XAB2XPA binding protein 2. (855 aa)
LSM6-2LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
RBMXL2RRM domain-containing protein. (393 aa)
H0Y1K1_OTOGAUncharacterized protein. (293 aa)
SNRPC-3U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
HSPA13Heat shock protein family A (Hsp70) member 13. (471 aa)
H0Y1C6_OTOGAUncharacterized protein; Belongs to the DEAD box helicase family. (411 aa)
H0Y150_OTOGACSP domain-containing protein. (200 aa)
H0Y0R1_OTOGAUncharacterized protein. (420 aa)
H0Y000_OTOGAUncharacterized protein; Belongs to the heat shock protein 70 family. (538 aa)
H0XZL8_OTOGAUncharacterized protein. (227 aa)
H0XZC7_OTOGARRM domain-containing protein. (285 aa)
H0XZ80_OTOGAUncharacterized protein. (447 aa)
LOC100967121Uncharacterized protein. (316 aa)
H0XYH4_OTOGARRM domain-containing protein. (295 aa)
H0XYD5_OTOGAUncharacterized protein. (413 aa)
H0XY77_OTOGARRM domain-containing protein. (331 aa)
ZC2HC1CZinc finger C2HC-type containing 1C. (527 aa)
LSM3-3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
RBM14RNA binding motif protein 14. (669 aa)
SNW1SNW domain containing 1. (536 aa)
TCERG1Transcription elongation regulator 1. (1098 aa)
SNRPC-2U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (178 aa)
H0XXF8_OTOGAUncharacterized protein. (607 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (152 aa)
H0XXD5_OTOGAUncharacterized protein. (291 aa)
HSPA2Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family. (635 aa)
H0XX70_OTOGAUncharacterized protein. (104 aa)
SRSF1Uncharacterized protein. (256 aa)
H0XX05_OTOGARRM domain-containing protein. (297 aa)
RBM24RNA binding motif protein 24. (236 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
H0XWX1_OTOGARRM domain-containing protein. (294 aa)
H0XWW2_OTOGARRM domain-containing protein. (293 aa)
LOC100953940Uncharacterized protein. (231 aa)
NAA38N(alpha)-acetyltransferase 38, NatC auxiliary subunit. (176 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
WACWW domain containing adaptor with coiled-coil. (646 aa)
LOC100957263Sm domain-containing protein. (86 aa)
DDX51DEAD-box helicase 51; Belongs to the DEAD box helicase family. (665 aa)
BTBD19BTB domain containing 19. (291 aa)
RP9RP9 pre-mRNA splicing factor. (221 aa)
H0XS21_OTOGARRM domain-containing protein. (242 aa)
H0XS57_OTOGARRM domain-containing protein. (301 aa)
H0XS58_OTOGARRM domain-containing protein. (213 aa)
H0XS69_OTOGAUncharacterized protein. (368 aa)
H0XSL2_OTOGASm domain-containing protein. (102 aa)
H0XSM7_OTOGAUncharacterized protein. (260 aa)
H0XSR3_OTOGAUncharacterized protein. (429 aa)
H0XSS8_OTOGACalponin-homology (CH) domain-containing protein. (166 aa)
H0XT46_OTOGAUncharacterized protein. (487 aa)
SF3A2Splicing factor 3a subunit 2. (464 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (519 aa)
H0XTP5_OTOGACSP domain-containing protein. (220 aa)
H0XTQ5_OTOGAUncharacterized protein. (110 aa)
H0XTV6_OTOGACSP domain-containing protein. (260 aa)
H0XU41_OTOGASmall nuclear ribonucleoprotein-associated protein. (214 aa)
H0XU79_OTOGARRM domain-containing protein. (209 aa)
H0XUE9_OTOGAUncharacterized protein. (148 aa)
H0XUH3_OTOGACSD domain-containing protein. (132 aa)
H0XUH9_OTOGARRM domain-containing protein. (302 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (440 aa)
H0XUN3_OTOGACSP domain-containing protein. (288 aa)
H0XUN5_OTOGACSP domain-containing protein. (300 aa)
SRSF2RRM domain-containing protein. (221 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (148 aa)
H0XVW6_OTOGARRM domain-containing protein. (217 aa)
H0XW07_OTOGABTB domain-containing protein. (500 aa)
HSPA12BHeat shock protein family A (Hsp70) member 12B. (686 aa)
H0XW28_OTOGARRM domain-containing protein. (148 aa)
H0XW89_OTOGAUncharacterized protein. (360 aa)
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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