(6 nodes) Mixed, incl. Lipoprotein localization, and Sec-independent protein translocase protein TatA/B/E network (Campylobacter lari)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	argS	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d. (531 aa)
	tatA	Sec-independent protein translocase, MttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (79 aa)
	gmk	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. (204 aa)
	Cla_1090	Conserved hypothetical protein. (460 aa)
	Cla_1092	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran. (211 aa)
	lolC	Conserved hypothetical integral membrane protein, putative permease; Pfam match to PF02687.12 FtsX. (400 aa)

Your Current Organism:

Campylobacter lari

NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cla_1090	Cla_1092	Cla_1090	Cla_1092	Conserved hypothetical protein.	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	0.661
Cla_1090	argS	Cla_1090	Cla_1087	Conserved hypothetical protein.	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d.	0.804
Cla_1090	gmk	Cla_1090	Cla_1089	Conserved hypothetical protein.	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	0.804
Cla_1090	tatA	Cla_1090	Cla_1088	Conserved hypothetical protein.	Sec-independent protein translocase, MttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.806
Cla_1092	Cla_1090	Cla_1092	Cla_1090	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	Conserved hypothetical protein.	0.661
Cla_1092	argS	Cla_1092	Cla_1087	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d.	0.661
Cla_1092	gmk	Cla_1092	Cla_1089	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	0.682
Cla_1092	lolC	Cla_1092	Cla_1139	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	Conserved hypothetical integral membrane protein, putative permease; Pfam match to PF02687.12 FtsX.	0.726
Cla_1092	tatA	Cla_1092	Cla_1088	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	Sec-independent protein translocase, MttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.665
argS	Cla_1090	Cla_1087	Cla_1090	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d.	Conserved hypothetical protein.	0.804
argS	Cla_1092	Cla_1087	Cla_1092	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d.	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	0.661
argS	gmk	Cla_1087	Cla_1089	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d.	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	0.976
argS	tatA	Cla_1087	Cla_1088	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d.	Sec-independent protein translocase, MttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.812
gmk	Cla_1090	Cla_1089	Cla_1090	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	Conserved hypothetical protein.	0.804
gmk	Cla_1092	Cla_1089	Cla_1092	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	0.682
gmk	argS	Cla_1089	Cla_1087	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	arginyl-tRNA synthetase; Pfam matches to PF03485.7 Arg_tRNA_synt_N, and to PF00750.10 tRNA-synt_1d.	0.976
gmk	tatA	Cla_1089	Cla_1088	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.	Sec-independent protein translocase, MttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.821
lolC	Cla_1092	Cla_1139	Cla_1092	Conserved hypothetical integral membrane protein, putative permease; Pfam match to PF02687.12 FtsX.	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	0.726
tatA	Cla_1090	Cla_1088	Cla_1090	Sec-independent protein translocase, MttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	Conserved hypothetical protein.	0.806
tatA	Cla_1092	Cla_1088	Cla_1092	Sec-independent protein translocase, MttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.	0.665