STRINGSTRING
Cla_1546 Cla_1546 Cla_0141 Cla_0141 Cla_0383 Cla_0383 Cla_1331 Cla_1331 Cla_1547 Cla_1547
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cla_1546MCP-domain signal transduction protein; Pfam matches to PF02743.9 Cache_1, and to PF00015.12 MCPsignal. (660 aa)
Cla_0141MCP-domain signal transduction protein; Pfam match to PF00015.12 MCPsignal. (658 aa)
Cla_0383MCP-domain signal transduction protein; Pfam matches to PF02743.9 Cache_1, and to PF00672.16 HAMP. (656 aa)
Cla_1331MCP-domain signal transduction protein; Pfam matches to PF00672.16 HAMP, and to PF00015.12 MCPsignal. (678 aa)
Cla_1547MCP-domain signal transduction protein; Pfam match to PF00015.12 MCPsignal. (657 aa)
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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