(5 nodes) K homology domain-like, alpha/beta, and Initiation factor network (Corynebacterium jeikeium)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

Your Input:
	rbfA	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (141 aa)
	infB	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (922 aa)
	jk1143	Putative nucleic-acid-binding protein implicated in transcription termination. (114 aa)
	nusA	N utilization substance protein A; Participates in both transcription termination and antitermination. (337 aa)
	rimP	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. (191 aa)

Your Current Organism:

Corynebacterium jeikeium

NCBI taxonomy Id: 306537
Other names: C. jeikeium K411, Corynebacterium jeikeium K411, Corynebacterium jeikeium str. K411, Corynebacterium jeikeium strain K411

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
infB	jk1143	jk1142	jk1143	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Putative nucleic-acid-binding protein implicated in transcription termination.	0.886
infB	nusA	jk1142	jk1144	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	N utilization substance protein A; Participates in both transcription termination and antitermination.	0.979
infB	rbfA	jk1142	jk1141	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.997
infB	rimP	jk1142	jk1145	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.905
jk1143	infB	jk1143	jk1142	Putative nucleic-acid-binding protein implicated in transcription termination.	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	0.886
jk1143	nusA	jk1143	jk1144	Putative nucleic-acid-binding protein implicated in transcription termination.	N utilization substance protein A; Participates in both transcription termination and antitermination.	0.925
jk1143	rbfA	jk1143	jk1141	Putative nucleic-acid-binding protein implicated in transcription termination.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.705
jk1143	rimP	jk1143	jk1145	Putative nucleic-acid-binding protein implicated in transcription termination.	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.928
nusA	infB	jk1144	jk1142	N utilization substance protein A; Participates in both transcription termination and antitermination.	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	0.979
nusA	jk1143	jk1144	jk1143	N utilization substance protein A; Participates in both transcription termination and antitermination.	Putative nucleic-acid-binding protein implicated in transcription termination.	0.925
nusA	rbfA	jk1144	jk1141	N utilization substance protein A; Participates in both transcription termination and antitermination.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.702
nusA	rimP	jk1144	jk1145	N utilization substance protein A; Participates in both transcription termination and antitermination.	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.986
rbfA	infB	jk1141	jk1142	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	0.997
rbfA	jk1143	jk1141	jk1143	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	Putative nucleic-acid-binding protein implicated in transcription termination.	0.705
rbfA	nusA	jk1141	jk1144	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	N utilization substance protein A; Participates in both transcription termination and antitermination.	0.702
rbfA	rimP	jk1141	jk1145	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	0.883
rimP	infB	jk1145	jk1142	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.	0.905
rimP	jk1143	jk1145	jk1143	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	Putative nucleic-acid-binding protein implicated in transcription termination.	0.928
rimP	nusA	jk1145	jk1144	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	N utilization substance protein A; Participates in both transcription termination and antitermination.	0.986
rimP	rbfA	jk1145	jk1141	Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.883