Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccdA | ccsA | jk1892 | jk1890 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | Cytochrome c biogenesis protein. | 0.987 |
| ccdA | ccsB | jk1892 | jk1891 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | Membrane protein required for cytochrome c biosynthesis. | 0.956 |
| ccdA | ccsX | jk1892 | jk1893 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | Thiol-disulfide isomerase/thioredoxin. | 0.998 |
| ccdA | hemA | jk1892 | jk1902 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.865 |
| ccdA | hemB | jk1892 | jk1899 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | Porphobilinogen synthase; Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) (Porphobilinogen synthase) (ALAD) (ALADH); Belongs to the ALAD family. | 0.602 |
| ccdA | hemD | jk1892 | jk1900 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase; Porphyrin biosynthesis protein HEMD [Includes: Uroporphyrin-III C- methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM); Uroporphyrinogen-III synthase (EC 4.2.1.75) (UROS) (Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane hydrolyase [cyclizing])].,May catalyze sequential reactions to synthesize UroIII from hydroxymethylbilane (HMB) and then precorrin-2 which are intermediate compounds in both vitamin B12 and siroheme biosyntheses. | 0.699 |
| ccdA | hemL | jk1892 | jk1895 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | 0.960 |
| ccdA | jk1894 | jk1892 | jk1894 | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | Probable phosphoglycerate mutase gpmB (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM). | 0.884 |
| ccsA | ccdA | jk1890 | jk1892 | Cytochrome c biogenesis protein. | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | 0.987 |
| ccsA | ccsB | jk1890 | jk1891 | Cytochrome c biogenesis protein. | Membrane protein required for cytochrome c biosynthesis. | 0.981 |
| ccsA | ccsX | jk1890 | jk1893 | Cytochrome c biogenesis protein. | Thiol-disulfide isomerase/thioredoxin. | 0.992 |
| ccsA | hemA | jk1890 | jk1902 | Cytochrome c biogenesis protein. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.689 |
| ccsA | hemB | jk1890 | jk1899 | Cytochrome c biogenesis protein. | Porphobilinogen synthase; Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) (Porphobilinogen synthase) (ALAD) (ALADH); Belongs to the ALAD family. | 0.500 |
| ccsA | hemC | jk1890 | jk1901 | Cytochrome c biogenesis protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.438 |
| ccsA | hemD | jk1890 | jk1900 | Cytochrome c biogenesis protein. | uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase; Porphyrin biosynthesis protein HEMD [Includes: Uroporphyrin-III C- methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM); Uroporphyrinogen-III synthase (EC 4.2.1.75) (UROS) (Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane hydrolyase [cyclizing])].,May catalyze sequential reactions to synthesize UroIII from hydroxymethylbilane (HMB) and then precorrin-2 which are intermediate compounds in both vitamin B12 and siroheme biosyntheses. | 0.823 |
| ccsA | hemL | jk1890 | jk1895 | Cytochrome c biogenesis protein. | Glutamate-1-semialdehyde 21-aminomutase (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT). | 0.783 |
| ccsA | jk1894 | jk1890 | jk1894 | Cytochrome c biogenesis protein. | Probable phosphoglycerate mutase gpmB (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM). | 0.668 |
| ccsB | ccdA | jk1891 | jk1892 | Membrane protein required for cytochrome c biosynthesis. | Cytochrome c-type biogenesis protein ccdA.,Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spore coat (By similarity). | 0.956 |
| ccsB | ccsA | jk1891 | jk1890 | Membrane protein required for cytochrome c biosynthesis. | Cytochrome c biogenesis protein. | 0.981 |
| ccsB | ccsX | jk1891 | jk1893 | Membrane protein required for cytochrome c biosynthesis. | Thiol-disulfide isomerase/thioredoxin. | 0.917 |
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