52 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hstH2A-6	Histone H2A; Belongs to the histone H2A family. (129 aa)
	hstH3-8	Histone H3; Belongs to the histone H3 family. (135 aa)
	hstH2B-7	Histone H2B; Belongs to the histone H2B family. (159 aa)
	hstH2A-7	Histone H2A; Belongs to the histone H2A family. (129 aa)
	hstH2B-14	Histone H2B; Belongs to the histone H2B family. (161 aa)
	hstH2B-15	Histone H2B; Belongs to the histone H2B family. (160 aa)
	D8TKR7_VOLCA	WD_REPEATS_REGION domain-containing protein. (734 aa)
	hstH2B-1	Histone H2B; Belongs to the histone H2B family. (157 aa)
	D8TN97_VOLCA	WD_REPEATS_REGION domain-containing protein. (418 aa)
	hstH2A-8	Histone H2A; Belongs to the histone H2A family. (131 aa)
	hstH2B-8	Histone H2B; Belongs to the histone H2B family. (154 aa)
	VSET4	Histone H3 Lys 4 methyltransferase. (2171 aa)
	hstH2A-10	Histone H2A; Belongs to the histone H2A family. (131 aa)
	D8TP10_VOLCA	Histone H2B; Belongs to the histone H2B family. (154 aa)
	hstH2B-11	Histone H2B; Belongs to the histone H2B family. (155 aa)
	hstH2A-11	Histone H2A; Belongs to the histone H2A family. (131 aa)
	hstH4-13	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa)
	D8TQ56_VOLCA	Histone H2A; Belongs to the histone H2A family. (169 aa)
	hstH2B-12	Histone H2B; Belongs to the histone H2B family. (121 aa)
	VMUT11	WD40 protein. (311 aa)
	D8TRF0_VOLCA	Uncharacterized protein. (1448 aa)
	pcgA	Polycomb group protein. (375 aa)
	D8TS63_VOLCA	SET domain-containing protein. (467 aa)
	D8TSQ5_VOLCA	Histone H2A; Belongs to the histone H2A family. (131 aa)
	D8TTI3_VOLCA	Histone H3 lys4 methyltransferase. (118 aa)
	D8TU28_VOLCA	Histone H2A; Belongs to the histone H2A family. (129 aa)
	D8TYZ2_VOLCA	Uncharacterized protein. (807 aa)
	D8TZ02_VOLCA	Uncharacterized protein. (1516 aa)
	hstH2A-9	Histone H2A; Belongs to the histone H2A family. (131 aa)
	hstH2B-9	Histone H2B; Belongs to the histone H2B family. (156 aa)
	D8TZE2_VOLCA	CW-type domain-containing protein. (857 aa)
	D8U149_VOLCA	Uncharacterized protein. (213 aa)
	VSET3	Histone H3 methyltransferase. (653 aa)
	D8U4W7_VOLCA	RING-type domain-containing protein. (215 aa)
	D8U6X1_VOLCA	Uncharacterized protein. (785 aa)
	VSET2	Histone H3 methyltransferase. (261 aa)
	D8UBB4_VOLCA	JmjC domain-containing protein. (102 aa)
	VTX1	Histone H3 methyltransferase/Trithorax. (2029 aa)
	D8UBS3_VOLCA	Histone domain-containing protein. (143 aa)
	SMYD2	SET and zf-MYND domain-containing protein. (265 aa)
	hstH2B-4	Histone H2B; Belongs to the histone H2B family. (155 aa)
	hstH2A-4	Histone H2A; Belongs to the histone H2A family. (129 aa)
	hstH2A-5	Histone H2A; Belongs to the histone H2A family. (130 aa)
	D8UEY9_VOLCA	WD_REPEATS_REGION domain-containing protein. (602 aa)
	D8UF77_VOLCA	TSPc domain-containing protein. (551 aa)
	ASH2L	Uncharacterized protein ASH2L. (353 aa)
	D8UI63_VOLCA	SET domain-containing protein. (65 aa)
	D8UI64_VOLCA	CXC domain-containing protein. (510 aa)
	VMUT9	Histone kinase. (696 aa)
	D8UJG6_VOLCA	Histone domain-containing protein. (105 aa)
	D8UJW5_VOLCA	RING-type domain-containing protein. (663 aa)
	hstH2B-13	Histone H2B; Belongs to the histone H2B family. (142 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASH2L	D8TP10_VOLCA	D8UFI6	D8TP10	Uncharacterized protein ASH2L.	Histone H2B; Belongs to the histone H2B family.	0.400
ASH2L	D8TQ56_VOLCA	D8UFI6	D8TQ56	Uncharacterized protein ASH2L.	Histone H2A; Belongs to the histone H2A family.	0.577
ASH2L	D8TS63_VOLCA	D8UFI6	D8TS63	Uncharacterized protein ASH2L.	SET domain-containing protein.	0.503
ASH2L	D8TSQ5_VOLCA	D8UFI6	D8TSQ5	Uncharacterized protein ASH2L.	Histone H2A; Belongs to the histone H2A family.	0.577
ASH2L	D8TTI3_VOLCA	D8UFI6	D8TTI3	Uncharacterized protein ASH2L.	Histone H3 lys4 methyltransferase.	0.845
ASH2L	D8TU28_VOLCA	D8UFI6	D8TU28	Uncharacterized protein ASH2L.	Histone H2A; Belongs to the histone H2A family.	0.577
ASH2L	D8TZ02_VOLCA	D8UFI6	D8TZ02	Uncharacterized protein ASH2L.	Uncharacterized protein.	0.845
ASH2L	D8TZE2_VOLCA	D8UFI6	D8TZE2	Uncharacterized protein ASH2L.	CW-type domain-containing protein.	0.570
ASH2L	D8U149_VOLCA	D8UFI6	D8U149	Uncharacterized protein ASH2L.	Uncharacterized protein.	0.674
ASH2L	D8UBB4_VOLCA	D8UFI6	D8UBB4	Uncharacterized protein ASH2L.	JmjC domain-containing protein.	0.642
ASH2L	D8UBS3_VOLCA	D8UFI6	D8UBS3	Uncharacterized protein ASH2L.	Histone domain-containing protein.	0.884
ASH2L	D8UEY9_VOLCA	D8UFI6	D8UEY9	Uncharacterized protein ASH2L.	WD_REPEATS_REGION domain-containing protein.	0.998
ASH2L	D8UF77_VOLCA	D8UFI6	D8UF77	Uncharacterized protein ASH2L.	TSPc domain-containing protein.	0.570
ASH2L	D8UI63_VOLCA	D8UFI6	D8UI63	Uncharacterized protein ASH2L.	SET domain-containing protein.	0.632
ASH2L	D8UI64_VOLCA	D8UFI6	D8UI64	Uncharacterized protein ASH2L.	CXC domain-containing protein.	0.632
ASH2L	D8UJG6_VOLCA	D8UFI6	D8UJG6	Uncharacterized protein ASH2L.	Histone domain-containing protein.	0.884
ASH2L	SMYD2	D8UFI6	D8UDD9	Uncharacterized protein ASH2L.	SET and zf-MYND domain-containing protein.	0.503
ASH2L	VMUT11	D8UFI6	D8TQI3	Uncharacterized protein ASH2L.	WD40 protein.	0.581
ASH2L	VSET2	D8UFI6	D8U7V2	Uncharacterized protein ASH2L.	Histone H3 methyltransferase.	0.570
ASH2L	VSET3	D8UFI6	D8U227	Uncharacterized protein ASH2L.	Histone H3 methyltransferase.	0.533