6 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TRN4_VOLCA	tRNA (adenine(58)-N(1))-methyltransferase. (337 aa)
	D8TW75_VOLCA	WD_REPEATS_REGION domain-containing protein. (648 aa)
	D8TXN8_VOLCA	Uncharacterized protein. (222 aa)
	D8U7R9_VOLCA	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (297 aa)
	D8UA38_VOLCA	DUF2428 domain-containing protein. (2925 aa)
	D8UAV1_VOLCA	Uncharacterized protein. (701 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TRN4_VOLCA	D8TW75_VOLCA	D8TRN4	D8TW75	tRNA (adenine(58)-N(1))-methyltransferase.	WD_REPEATS_REGION domain-containing protein.	0.723
D8TRN4_VOLCA	D8TXN8_VOLCA	D8TRN4	D8TXN8	tRNA (adenine(58)-N(1))-methyltransferase.	Uncharacterized protein.	0.642
D8TRN4_VOLCA	D8U7R9_VOLCA	D8TRN4	D8U7R9	tRNA (adenine(58)-N(1))-methyltransferase.	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	0.693
D8TRN4_VOLCA	D8UA38_VOLCA	D8TRN4	D8UA38	tRNA (adenine(58)-N(1))-methyltransferase.	DUF2428 domain-containing protein.	0.451
D8TRN4_VOLCA	D8UAV1_VOLCA	D8TRN4	D8UAV1	tRNA (adenine(58)-N(1))-methyltransferase.	Uncharacterized protein.	0.983
D8TW75_VOLCA	D8TRN4_VOLCA	D8TW75	D8TRN4	WD_REPEATS_REGION domain-containing protein.	tRNA (adenine(58)-N(1))-methyltransferase.	0.723
D8TW75_VOLCA	D8TXN8_VOLCA	D8TW75	D8TXN8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.984
D8TW75_VOLCA	D8U7R9_VOLCA	D8TW75	D8U7R9	WD_REPEATS_REGION domain-containing protein.	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	0.744
D8TW75_VOLCA	D8UA38_VOLCA	D8TW75	D8UA38	WD_REPEATS_REGION domain-containing protein.	DUF2428 domain-containing protein.	0.572
D8TW75_VOLCA	D8UAV1_VOLCA	D8TW75	D8UAV1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.688
D8TXN8_VOLCA	D8TRN4_VOLCA	D8TXN8	D8TRN4	Uncharacterized protein.	tRNA (adenine(58)-N(1))-methyltransferase.	0.642
D8TXN8_VOLCA	D8TW75_VOLCA	D8TXN8	D8TW75	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.984
D8TXN8_VOLCA	D8U7R9_VOLCA	D8TXN8	D8U7R9	Uncharacterized protein.	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	0.866
D8TXN8_VOLCA	D8UA38_VOLCA	D8TXN8	D8UA38	Uncharacterized protein.	DUF2428 domain-containing protein.	0.429
D8TXN8_VOLCA	D8UAV1_VOLCA	D8TXN8	D8UAV1	Uncharacterized protein.	Uncharacterized protein.	0.691
D8U7R9_VOLCA	D8TRN4_VOLCA	D8U7R9	D8TRN4	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	tRNA (adenine(58)-N(1))-methyltransferase.	0.693
D8U7R9_VOLCA	D8TW75_VOLCA	D8U7R9	D8TW75	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	WD_REPEATS_REGION domain-containing protein.	0.744
D8U7R9_VOLCA	D8TXN8_VOLCA	D8U7R9	D8TXN8	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	Uncharacterized protein.	0.866
D8U7R9_VOLCA	D8UA38_VOLCA	D8U7R9	D8UA38	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	DUF2428 domain-containing protein.	0.967
D8U7R9_VOLCA	D8UAV1_VOLCA	D8U7R9	D8UAV1	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	Uncharacterized protein.	0.843