42 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TGX3_VOLCA	Uncharacterized protein. (402 aa)
	D8TK63_VOLCA	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. (480 aa)
	D8TKL9_VOLCA	Uncharacterized protein. (187 aa)
	D8TMM6_VOLCA	SpoU_methylase domain-containing protein. (279 aa)
	D8TPQ9_VOLCA	SpoU_methylase domain-containing protein. (155 aa)
	ackA	Probable acetate kinase. (452 aa)
	D8TQ82_VOLCA	Phosphate acetyltransferase. (803 aa)
	D8TQ83_VOLCA	Iron hydrogenase assembly protein. (1198 aa)
	D8TQ84_VOLCA	Hydrogenase assembly factor. (558 aa)
	D8TR25_VOLCA	Uncharacterized protein. (392 aa)
	D8TT33_VOLCA	Uncharacterized protein. (162 aa)
	D8TT79_VOLCA	Phosphate acetyltransferase. (3536 aa)
	D8TTA6_VOLCA	Uncharacterized protein. (610 aa)
	pus5	Pseudouridine synthase. (712 aa)
	D8TUB5_VOLCA	PseudoU_synth_2 domain-containing protein. (421 aa)
	D8TVS5_VOLCA	PseudoU_synth_2 domain-containing protein. (535 aa)
	D8TW65_VOLCA	OBG-type G domain-containing protein. (87 aa)
	D8TZA2_VOLCA	PseudoU_synth_2 domain-containing protein. (553 aa)
	pus6	Pseudouridine synthase. (367 aa)
	D8U1H1_VOLCA	Thioredoxin domain-containing protein. (478 aa)
	ackB	Probable acetate kinase. (448 aa)
	D8U2F3_VOLCA	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (596 aa)
	D8U3D5_VOLCA	SpoU_methylase domain-containing protein. (182 aa)
	D8U4A1_VOLCA	EngB-type G domain-containing protein. (295 aa)
	D8U585_VOLCA	TRUD domain-containing protein. (221 aa)
	pus7	Pseudouridine synthase mitochondrial. (955 aa)
	D8U600_VOLCA	GIDA_assoc domain-containing protein. (686 aa)
	D8U6B6_VOLCA	Uncharacterized protein. (677 aa)
	D8U7A7_VOLCA	EngA-type G domain-containing protein. (269 aa)
	D8U7J3_VOLCA	OBG-type G domain-containing protein. (480 aa)
	pus3	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (343 aa)
	D8U949_VOLCA	OBG-type G domain-containing protein. (699 aa)
	D8U9M8_VOLCA	G domain-containing protein. (434 aa)
	D8U9Y0_VOLCA	SpoU_methylase domain-containing protein. (162 aa)
	D8UA72_VOLCA	SpoU_methylase domain-containing protein. (148 aa)
	D8UBC2_VOLCA	SpoU_methylase domain-containing protein. (312 aa)
	D8UC13_VOLCA	Uncharacterized protein. (305 aa)
	D8UGY1_VOLCA	Uncharacterized protein. (701 aa)
	D8UHG4_VOLCA	EngB-type G domain-containing protein. (214 aa)
	D8UHV8_VOLCA	Uncharacterized protein. (337 aa)
	D8UJ79_VOLCA	Uncharacterized protein. (774 aa)
	D8UMP7_VOLCA	Uncharacterized protein. (107 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TGX3_VOLCA	D8TK63_VOLCA	D8TGX3	D8TK63	Uncharacterized protein.	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	0.696
D8TGX3_VOLCA	D8TPQ9_VOLCA	D8TGX3	D8TPQ9	Uncharacterized protein.	SpoU_methylase domain-containing protein.	0.663
D8TGX3_VOLCA	D8TQ83_VOLCA	D8TGX3	D8TQ83	Uncharacterized protein.	Iron hydrogenase assembly protein.	0.696
D8TGX3_VOLCA	D8TR25_VOLCA	D8TGX3	D8TR25	Uncharacterized protein.	Uncharacterized protein.	0.743
D8TGX3_VOLCA	D8TT33_VOLCA	D8TGX3	D8TT33	Uncharacterized protein.	Uncharacterized protein.	0.575
D8TGX3_VOLCA	D8TTA6_VOLCA	D8TGX3	D8TTA6	Uncharacterized protein.	Uncharacterized protein.	0.678
D8TGX3_VOLCA	D8TW65_VOLCA	D8TGX3	D8TW65	Uncharacterized protein.	OBG-type G domain-containing protein.	0.413
D8TGX3_VOLCA	D8TZA2_VOLCA	D8TGX3	D8TZA2	Uncharacterized protein.	PseudoU_synth_2 domain-containing protein.	0.670
D8TGX3_VOLCA	D8U1H1_VOLCA	D8TGX3	D8U1H1	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.743
D8TGX3_VOLCA	D8U2F3_VOLCA	D8TGX3	D8U2F3	Uncharacterized protein.	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.696
D8TGX3_VOLCA	D8U600_VOLCA	D8TGX3	D8U600	Uncharacterized protein.	GIDA_assoc domain-containing protein.	0.856
D8TGX3_VOLCA	D8U6B6_VOLCA	D8TGX3	D8U6B6	Uncharacterized protein.	Uncharacterized protein.	0.569
D8TGX3_VOLCA	D8U7A7_VOLCA	D8TGX3	D8U7A7	Uncharacterized protein.	EngA-type G domain-containing protein.	0.696
D8TGX3_VOLCA	D8U7J3_VOLCA	D8TGX3	D8U7J3	Uncharacterized protein.	OBG-type G domain-containing protein.	0.413
D8TGX3_VOLCA	D8U949_VOLCA	D8TGX3	D8U949	Uncharacterized protein.	OBG-type G domain-containing protein.	0.413
D8TGX3_VOLCA	D8UHV8_VOLCA	D8TGX3	D8UHV8	Uncharacterized protein.	Uncharacterized protein.	0.743
D8TGX3_VOLCA	D8UJ79_VOLCA	D8TGX3	D8UJ79	Uncharacterized protein.	Uncharacterized protein.	0.623
D8TK63_VOLCA	D8TGX3_VOLCA	D8TK63	D8TGX3	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	Uncharacterized protein.	0.696
D8TK63_VOLCA	D8TR25_VOLCA	D8TK63	D8TR25	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	Uncharacterized protein.	0.743
D8TK63_VOLCA	D8TUB5_VOLCA	D8TK63	D8TUB5	GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.	PseudoU_synth_2 domain-containing protein.	0.405