(6 nodes) Alpha/beta knot methyltransferases, and rRNA (cytosine) methyltransferase activity network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TKL9_VOLCA	Uncharacterized protein. (187 aa)
	D8TPQ9_VOLCA	SpoU_methylase domain-containing protein. (155 aa)
	D8TT33_VOLCA	Uncharacterized protein. (162 aa)
	D8TTA6_VOLCA	Uncharacterized protein. (610 aa)
	D8TZA2_VOLCA	PseudoU_synth_2 domain-containing protein. (553 aa)
	D8UC13_VOLCA	Uncharacterized protein. (305 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TKL9_VOLCA	D8TPQ9_VOLCA	D8TKL9	D8TPQ9	Uncharacterized protein.	SpoU_methylase domain-containing protein.	0.662
D8TKL9_VOLCA	D8TT33_VOLCA	D8TKL9	D8TT33	Uncharacterized protein.	Uncharacterized protein.	0.617
D8TKL9_VOLCA	D8UC13_VOLCA	D8TKL9	D8UC13	Uncharacterized protein.	Uncharacterized protein.	0.667
D8TPQ9_VOLCA	D8TKL9_VOLCA	D8TPQ9	D8TKL9	SpoU_methylase domain-containing protein.	Uncharacterized protein.	0.662
D8TPQ9_VOLCA	D8TT33_VOLCA	D8TPQ9	D8TT33	SpoU_methylase domain-containing protein.	Uncharacterized protein.	0.618
D8TPQ9_VOLCA	D8TTA6_VOLCA	D8TPQ9	D8TTA6	SpoU_methylase domain-containing protein.	Uncharacterized protein.	0.559
D8TPQ9_VOLCA	D8TZA2_VOLCA	D8TPQ9	D8TZA2	SpoU_methylase domain-containing protein.	PseudoU_synth_2 domain-containing protein.	0.660
D8TPQ9_VOLCA	D8UC13_VOLCA	D8TPQ9	D8UC13	SpoU_methylase domain-containing protein.	Uncharacterized protein.	0.541
D8TT33_VOLCA	D8TKL9_VOLCA	D8TT33	D8TKL9	Uncharacterized protein.	Uncharacterized protein.	0.617
D8TT33_VOLCA	D8TPQ9_VOLCA	D8TT33	D8TPQ9	Uncharacterized protein.	SpoU_methylase domain-containing protein.	0.618
D8TT33_VOLCA	D8TTA6_VOLCA	D8TT33	D8TTA6	Uncharacterized protein.	Uncharacterized protein.	0.625
D8TT33_VOLCA	D8TZA2_VOLCA	D8TT33	D8TZA2	Uncharacterized protein.	PseudoU_synth_2 domain-containing protein.	0.419
D8TT33_VOLCA	D8UC13_VOLCA	D8TT33	D8UC13	Uncharacterized protein.	Uncharacterized protein.	0.623
D8TTA6_VOLCA	D8TPQ9_VOLCA	D8TTA6	D8TPQ9	Uncharacterized protein.	SpoU_methylase domain-containing protein.	0.559
D8TTA6_VOLCA	D8TT33_VOLCA	D8TTA6	D8TT33	Uncharacterized protein.	Uncharacterized protein.	0.625
D8TTA6_VOLCA	D8TZA2_VOLCA	D8TTA6	D8TZA2	Uncharacterized protein.	PseudoU_synth_2 domain-containing protein.	0.731
D8TTA6_VOLCA	D8UC13_VOLCA	D8TTA6	D8UC13	Uncharacterized protein.	Uncharacterized protein.	0.603
D8TZA2_VOLCA	D8TPQ9_VOLCA	D8TZA2	D8TPQ9	PseudoU_synth_2 domain-containing protein.	SpoU_methylase domain-containing protein.	0.660
D8TZA2_VOLCA	D8TT33_VOLCA	D8TZA2	D8TT33	PseudoU_synth_2 domain-containing protein.	Uncharacterized protein.	0.419
D8TZA2_VOLCA	D8TTA6_VOLCA	D8TZA2	D8TTA6	PseudoU_synth_2 domain-containing protein.	Uncharacterized protein.	0.731