(12 nodes) Proteasome accessory complex network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpn3	26S proteasome regulatory complex. (490 aa)
	rpt5	26S proteasome regulatory complex; Belongs to the AAA ATPase family. (428 aa)
	rpn7	26S proteasome regulatory complex. (385 aa)
	rpn6	26S proteasome regulatory complex. (421 aa)
	rpt6	26S proteasome regulatory complex; Belongs to the AAA ATPase family. (396 aa)
	rpn2	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (986 aa)
	D8U0Y3_VOLCA	PCI domain-containing protein. (561 aa)
	rpt1	26S proteasome regulatory complex; Belongs to the AAA ATPase family. (426 aa)
	rpn9	26S proteasome regulatory complex. (391 aa)
	rpn8	26S proteasome regulatory complex. (335 aa)
	rpn1	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (900 aa)
	rpt2	26S proteasome regulatory complex; Belongs to the AAA ATPase family. (444 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8U0Y3_VOLCA	rpn1	D8U0Y3	D8UK02	PCI domain-containing protein.	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
D8U0Y3_VOLCA	rpn2	D8U0Y3	D8TYP3	PCI domain-containing protein.	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
D8U0Y3_VOLCA	rpn3	D8U0Y3	D8TIA8	PCI domain-containing protein.	26S proteasome regulatory complex.	0.999
D8U0Y3_VOLCA	rpn6	D8U0Y3	D8TW19	PCI domain-containing protein.	26S proteasome regulatory complex.	0.999
D8U0Y3_VOLCA	rpn7	D8U0Y3	D8TR02	PCI domain-containing protein.	26S proteasome regulatory complex.	0.999
D8U0Y3_VOLCA	rpn8	D8U0Y3	D8UA39	PCI domain-containing protein.	26S proteasome regulatory complex.	0.999
D8U0Y3_VOLCA	rpn9	D8U0Y3	D8U1H0	PCI domain-containing protein.	26S proteasome regulatory complex.	0.998
D8U0Y3_VOLCA	rpt1	D8U0Y3	D8U109	PCI domain-containing protein.	26S proteasome regulatory complex; Belongs to the AAA ATPase family.	0.999
D8U0Y3_VOLCA	rpt2	D8U0Y3	D8UKP8	PCI domain-containing protein.	26S proteasome regulatory complex; Belongs to the AAA ATPase family.	0.998
D8U0Y3_VOLCA	rpt5	D8U0Y3	D8TJB3	PCI domain-containing protein.	26S proteasome regulatory complex; Belongs to the AAA ATPase family.	0.999
D8U0Y3_VOLCA	rpt6	D8U0Y3	D8TXF8	PCI domain-containing protein.	26S proteasome regulatory complex; Belongs to the AAA ATPase family.	0.998
rpn1	D8U0Y3_VOLCA	D8UK02	D8U0Y3	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	PCI domain-containing protein.	0.999
rpn1	rpn2	D8UK02	D8TYP3	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
rpn1	rpn3	D8UK02	D8TIA8	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory complex.	0.999
rpn1	rpn6	D8UK02	D8TW19	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory complex.	0.999
rpn1	rpn7	D8UK02	D8TR02	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory complex.	0.998
rpn1	rpn8	D8UK02	D8UA39	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory complex.	0.999
rpn1	rpn9	D8UK02	D8U1H0	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory complex.	0.998
rpn1	rpt1	D8UK02	D8U109	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory complex; Belongs to the AAA ATPase family.	0.998
rpn1	rpt2	D8UK02	D8UKP8	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory complex; Belongs to the AAA ATPase family.	0.996