(11 nodes) Mixed, incl. ER ubiquitin ligase complex, and Sel1-like repeat network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TQ95_VOLCA	TGc domain-containing protein. (1753 aa)
	D8U3N4_VOLCA	RING-type domain-containing protein. (922 aa)
	D8U489_VOLCA	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (257 aa)
	D8U755_VOLCA	Uncharacterized protein. (377 aa)
	D8U9V3_VOLCA	Uncharacterized protein. (1579 aa)
	D8UA83_VOLCA	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (213 aa)
	D8UBS4_VOLCA	Uncharacterized protein. (934 aa)
	D8UDJ3_VOLCA	RING-type domain-containing protein. (349 aa)
	D8UEQ2_VOLCA	Uncharacterized protein. (1637 aa)
	D8UI78_VOLCA	Uncharacterized protein. (499 aa)
	D8UJK3_VOLCA	PRKCSH domain-containing protein. (257 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TQ95_VOLCA	D8U3N4_VOLCA	D8TQ95	D8U3N4	TGc domain-containing protein.	RING-type domain-containing protein.	0.686
D8TQ95_VOLCA	D8U489_VOLCA	D8TQ95	D8U489	TGc domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.642
D8TQ95_VOLCA	D8U755_VOLCA	D8TQ95	D8U755	TGc domain-containing protein.	Uncharacterized protein.	0.686
D8TQ95_VOLCA	D8UA83_VOLCA	D8TQ95	D8UA83	TGc domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.634
D8TQ95_VOLCA	D8UDJ3_VOLCA	D8TQ95	D8UDJ3	TGc domain-containing protein.	RING-type domain-containing protein.	0.686
D8TQ95_VOLCA	D8UI78_VOLCA	D8TQ95	D8UI78	TGc domain-containing protein.	Uncharacterized protein.	0.634
D8TQ95_VOLCA	D8UJK3_VOLCA	D8TQ95	D8UJK3	TGc domain-containing protein.	PRKCSH domain-containing protein.	0.483
D8U3N4_VOLCA	D8TQ95_VOLCA	D8U3N4	D8TQ95	RING-type domain-containing protein.	TGc domain-containing protein.	0.686
D8U3N4_VOLCA	D8U489_VOLCA	D8U3N4	D8U489	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.747
D8U3N4_VOLCA	D8U9V3_VOLCA	D8U3N4	D8U9V3	RING-type domain-containing protein.	Uncharacterized protein.	0.680
D8U3N4_VOLCA	D8UA83_VOLCA	D8U3N4	D8UA83	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.747
D8U3N4_VOLCA	D8UBS4_VOLCA	D8U3N4	D8UBS4	RING-type domain-containing protein.	Uncharacterized protein.	0.680
D8U3N4_VOLCA	D8UEQ2_VOLCA	D8U3N4	D8UEQ2	RING-type domain-containing protein.	Uncharacterized protein.	0.680
D8U3N4_VOLCA	D8UI78_VOLCA	D8U3N4	D8UI78	RING-type domain-containing protein.	Uncharacterized protein.	0.747
D8U3N4_VOLCA	D8UJK3_VOLCA	D8U3N4	D8UJK3	RING-type domain-containing protein.	PRKCSH domain-containing protein.	0.916
D8U489_VOLCA	D8TQ95_VOLCA	D8U489	D8TQ95	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	TGc domain-containing protein.	0.642
D8U489_VOLCA	D8U3N4_VOLCA	D8U489	D8U3N4	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	RING-type domain-containing protein.	0.747
D8U489_VOLCA	D8U755_VOLCA	D8U489	D8U755	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.747
D8U489_VOLCA	D8U9V3_VOLCA	D8U489	D8U9V3	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.688
D8U489_VOLCA	D8UA83_VOLCA	D8U489	D8UA83	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.910