27 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8U0E6_VOLCA	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (382 aa)
	D8U0M5_VOLCA	Uncharacterized protein. (847 aa)
	D8U4F8_VOLCA	Uncharacterized protein. (440 aa)
	D8U5N3_VOLCA	Exonuclease domain-containing protein. (201 aa)
	D8U7N7_VOLCA	Uncharacterized protein. (182 aa)
	D8U7N9_VOLCA	3'-5' exonuclease domain-containing protein. (756 aa)
	D8U7P1_VOLCA	3'-5' exonuclease domain-containing protein. (1044 aa)
	D8UBJ9_VOLCA	CLP1_P domain-containing protein. (631 aa)
	D8UD65_VOLCA	Uncharacterized protein. (1484 aa)
	D8UG18_VOLCA	BOP1NT domain-containing protein. (714 aa)
	D8UH46_VOLCA	Uncharacterized protein. (280 aa)
	D8UI23_VOLCA	Uncharacterized protein. (991 aa)
	D8UJX9_VOLCA	Uncharacterized protein. (516 aa)
	D8TJ90_VOLCA	Uncharacterized protein. (311 aa)
	D8TJ79_VOLCA	Kri1_C domain-containing protein. (843 aa)
	D8THU7_VOLCA	RRM domain-containing protein. (429 aa)
	D8TGZ0_VOLCA	BRCT domain-containing protein. (470 aa)
	D8TN51_VOLCA	S1 motif domain-containing protein. (321 aa)
	D8TP13_VOLCA	Uncharacterized protein. (260 aa)
	D8TPB1_VOLCA	3'-5' exonuclease domain-containing protein. (191 aa)
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (88 aa)
	D8TVA9_VOLCA	Uncharacterized protein. (311 aa)
	D8TW80_VOLCA	Uncharacterized protein. (580 aa)
	D8TXJ3_VOLCA	Brix domain-containing protein. (319 aa)
	D8TY61_VOLCA	KH_dom_type_1 domain-containing protein. (224 aa)
	D8TYG6_VOLCA	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (470 aa)
	D8TZN1_VOLCA	Ribosomal_L28e domain-containing protein. (399 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TGZ0_VOLCA	D8TJ79_VOLCA	D8TGZ0	D8TJ79	BRCT domain-containing protein.	Kri1_C domain-containing protein.	0.570
D8TGZ0_VOLCA	D8TP13_VOLCA	D8TGZ0	D8TP13	BRCT domain-containing protein.	Uncharacterized protein.	0.993
D8TGZ0_VOLCA	D8TPB1_VOLCA	D8TGZ0	D8TPB1	BRCT domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.548
D8TGZ0_VOLCA	D8TW80_VOLCA	D8TGZ0	D8TW80	BRCT domain-containing protein.	Uncharacterized protein.	0.795
D8TGZ0_VOLCA	D8TXJ3_VOLCA	D8TGZ0	D8TXJ3	BRCT domain-containing protein.	Brix domain-containing protein.	0.977
D8TGZ0_VOLCA	D8TYG6_VOLCA	D8TGZ0	D8TYG6	BRCT domain-containing protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.999
D8TGZ0_VOLCA	D8TZN1_VOLCA	D8TGZ0	D8TZN1	BRCT domain-containing protein.	Ribosomal_L28e domain-containing protein.	0.980
D8TGZ0_VOLCA	D8U0E6_VOLCA	D8TGZ0	D8U0E6	BRCT domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.953
D8TGZ0_VOLCA	D8U0M5_VOLCA	D8TGZ0	D8U0M5	BRCT domain-containing protein.	Uncharacterized protein.	0.787
D8TGZ0_VOLCA	D8U4F8_VOLCA	D8TGZ0	D8U4F8	BRCT domain-containing protein.	Uncharacterized protein.	0.985
D8TGZ0_VOLCA	D8U7N7_VOLCA	D8TGZ0	D8U7N7	BRCT domain-containing protein.	Uncharacterized protein.	0.548
D8TGZ0_VOLCA	D8U7N9_VOLCA	D8TGZ0	D8U7N9	BRCT domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.548
D8TGZ0_VOLCA	D8U7P1_VOLCA	D8TGZ0	D8U7P1	BRCT domain-containing protein.	3'-5' exonuclease domain-containing protein.	0.548
D8TGZ0_VOLCA	D8UBJ9_VOLCA	D8TGZ0	D8UBJ9	BRCT domain-containing protein.	CLP1_P domain-containing protein.	0.699
D8TGZ0_VOLCA	D8UD65_VOLCA	D8TGZ0	D8UD65	BRCT domain-containing protein.	Uncharacterized protein.	0.740
D8TGZ0_VOLCA	D8UG18_VOLCA	D8TGZ0	D8UG18	BRCT domain-containing protein.	BOP1NT domain-containing protein.	0.999
D8TGZ0_VOLCA	D8UH46_VOLCA	D8TGZ0	D8UH46	BRCT domain-containing protein.	Uncharacterized protein.	0.633
D8TGZ0_VOLCA	D8UI23_VOLCA	D8TGZ0	D8UI23	BRCT domain-containing protein.	Uncharacterized protein.	0.740
D8THU7_VOLCA	D8TJ79_VOLCA	D8THU7	D8TJ79	RRM domain-containing protein.	Kri1_C domain-containing protein.	0.544
D8THU7_VOLCA	D8TXJ3_VOLCA	D8THU7	D8TXJ3	RRM domain-containing protein.	Brix domain-containing protein.	0.439