14 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TGZ0_VOLCA	BRCT domain-containing protein. (470 aa)
	rpl35	Component of cytosolic 80S ribosome and 60S large subunit. (130 aa)
	D8TQJ3_VOLCA	RRM domain-containing protein. (185 aa)
	rpl7	Component of cytosolic 80S ribosome and 60S large subunit. (239 aa)
	D8TYG6_VOLCA	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (470 aa)
	D8U055_VOLCA	Uncharacterized protein. (793 aa)
	D8U4F8_VOLCA	Uncharacterized protein. (440 aa)
	D8U4G5_VOLCA	Uncharacterized protein. (202 aa)
	D8U6J2_VOLCA	RNA helicase. (485 aa)
	D8UBJ9_VOLCA	CLP1_P domain-containing protein. (631 aa)
	D8UBS1_VOLCA	Brix domain-containing protein. (332 aa)
	D8UG18_VOLCA	BOP1NT domain-containing protein. (714 aa)
	D8UHN9_VOLCA	HIT-type domain-containing protein. (689 aa)
	D8UIY5_VOLCA	Uncharacterized protein. (477 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TGZ0_VOLCA	D8TQJ3_VOLCA	D8TGZ0	D8TQJ3	BRCT domain-containing protein.	RRM domain-containing protein.	0.991
D8TGZ0_VOLCA	D8TYG6_VOLCA	D8TGZ0	D8TYG6	BRCT domain-containing protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.999
D8TGZ0_VOLCA	D8U4F8_VOLCA	D8TGZ0	D8U4F8	BRCT domain-containing protein.	Uncharacterized protein.	0.985
D8TGZ0_VOLCA	D8U6J2_VOLCA	D8TGZ0	D8U6J2	BRCT domain-containing protein.	RNA helicase.	0.918
D8TGZ0_VOLCA	D8UBJ9_VOLCA	D8TGZ0	D8UBJ9	BRCT domain-containing protein.	CLP1_P domain-containing protein.	0.699
D8TGZ0_VOLCA	D8UBS1_VOLCA	D8TGZ0	D8UBS1	BRCT domain-containing protein.	Brix domain-containing protein.	0.956
D8TGZ0_VOLCA	D8UG18_VOLCA	D8TGZ0	D8UG18	BRCT domain-containing protein.	BOP1NT domain-containing protein.	0.999
D8TGZ0_VOLCA	D8UIY5_VOLCA	D8TGZ0	D8UIY5	BRCT domain-containing protein.	Uncharacterized protein.	0.956
D8TGZ0_VOLCA	rpl35	D8TGZ0	D8TJN9	BRCT domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.794
D8TGZ0_VOLCA	rpl7	D8TGZ0	D8TWQ8	BRCT domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.981
D8TQJ3_VOLCA	D8TGZ0_VOLCA	D8TQJ3	D8TGZ0	RRM domain-containing protein.	BRCT domain-containing protein.	0.991
D8TQJ3_VOLCA	D8TYG6_VOLCA	D8TQJ3	D8TYG6	RRM domain-containing protein.	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.	0.992
D8TQJ3_VOLCA	D8U4F8_VOLCA	D8TQJ3	D8U4F8	RRM domain-containing protein.	Uncharacterized protein.	0.983
D8TQJ3_VOLCA	D8U6J2_VOLCA	D8TQJ3	D8U6J2	RRM domain-containing protein.	RNA helicase.	0.897
D8TQJ3_VOLCA	D8UBS1_VOLCA	D8TQJ3	D8UBS1	RRM domain-containing protein.	Brix domain-containing protein.	0.979
D8TQJ3_VOLCA	D8UG18_VOLCA	D8TQJ3	D8UG18	RRM domain-containing protein.	BOP1NT domain-containing protein.	0.982
D8TQJ3_VOLCA	D8UHN9_VOLCA	D8TQJ3	D8UHN9	RRM domain-containing protein.	HIT-type domain-containing protein.	0.414
D8TQJ3_VOLCA	D8UIY5_VOLCA	D8TQJ3	D8UIY5	RRM domain-containing protein.	Uncharacterized protein.	0.979
D8TQJ3_VOLCA	rpl35	D8TQJ3	D8TJN9	RRM domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.792
D8TQJ3_VOLCA	rpl7	D8TQJ3	D8TWQ8	RRM domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.990