(15 nodes) SCF ubiquitin ligase complex network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TNK5_VOLCA	Uncharacterized protein; Belongs to the SKP1 family. (158 aa)
	cks1	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (88 aa)
	D8TIZ9_VOLCA	Uncharacterized protein. (576 aa)
	D8UIV9_VOLCA	WD_REPEATS_REGION domain-containing protein. (816 aa)
	D8UIF6_VOLCA	Uncharacterized protein. (463 aa)
	D8UHA4_VOLCA	Uncharacterized protein. (581 aa)
	D8UFL2_VOLCA	WD_REPEATS_REGION domain-containing protein. (764 aa)
	D8U549_VOLCA	ApaG domain-containing protein. (481 aa)
	D8U4T9_VOLCA	RING-type domain-containing protein. (130 aa)
	D8U4E9_VOLCA	Uncharacterized protein. (2001 aa)
	D8U4A2_VOLCA	Uncharacterized protein. (224 aa)
	D8TWA9_VOLCA	F-box domain-containing protein. (315 aa)
	D8TVA8_VOLCA	Uncharacterized protein. (1205 aa)
	D8TQC5_VOLCA	Uncharacterized protein. (479 aa)
	D8TQ20_VOLCA	Nudix hydrolase domain-containing protein. (765 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TIZ9_VOLCA	D8TNK5_VOLCA	D8TIZ9	D8TNK5	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.621
D8TIZ9_VOLCA	D8U4T9_VOLCA	D8TIZ9	D8U4T9	Uncharacterized protein.	RING-type domain-containing protein.	0.541
D8TNK5_VOLCA	D8TIZ9_VOLCA	D8TNK5	D8TIZ9	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.621
D8TNK5_VOLCA	D8TQC5_VOLCA	D8TNK5	D8TQC5	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.845
D8TNK5_VOLCA	D8TVA8_VOLCA	D8TNK5	D8TVA8	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.685
D8TNK5_VOLCA	D8TWA9_VOLCA	D8TNK5	D8TWA9	Uncharacterized protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.980
D8TNK5_VOLCA	D8U4A2_VOLCA	D8TNK5	D8U4A2	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.845
D8TNK5_VOLCA	D8U4E9_VOLCA	D8TNK5	D8U4E9	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.621
D8TNK5_VOLCA	D8U4T9_VOLCA	D8TNK5	D8U4T9	Uncharacterized protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.998
D8TNK5_VOLCA	D8U549_VOLCA	D8TNK5	D8U549	Uncharacterized protein; Belongs to the SKP1 family.	ApaG domain-containing protein.	0.542
D8TNK5_VOLCA	D8UFL2_VOLCA	D8TNK5	D8UFL2	Uncharacterized protein; Belongs to the SKP1 family.	WD_REPEATS_REGION domain-containing protein.	0.956
D8TNK5_VOLCA	D8UHA4_VOLCA	D8TNK5	D8UHA4	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.621
D8TNK5_VOLCA	D8UIF6_VOLCA	D8TNK5	D8UIF6	Uncharacterized protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.621
D8TNK5_VOLCA	D8UIV9_VOLCA	D8TNK5	D8UIV9	Uncharacterized protein; Belongs to the SKP1 family.	WD_REPEATS_REGION domain-containing protein.	0.956
D8TNK5_VOLCA	cks1	D8TNK5	D8TKS3	Uncharacterized protein; Belongs to the SKP1 family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.937
D8TQC5_VOLCA	D8TNK5_VOLCA	D8TQC5	D8TNK5	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.845
D8TQC5_VOLCA	D8U4T9_VOLCA	D8TQC5	D8U4T9	Uncharacterized protein.	RING-type domain-containing protein.	0.533
D8TVA8_VOLCA	D8TNK5_VOLCA	D8TVA8	D8TNK5	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.685
D8TVA8_VOLCA	D8U4T9_VOLCA	D8TVA8	D8U4T9	Uncharacterized protein.	RING-type domain-containing protein.	0.689
D8TWA9_VOLCA	D8TNK5_VOLCA	D8TWA9	D8TNK5	F-box domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.980