20 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VTX1	Histone H3 methyltransferase/Trithorax. (2029 aa)
	SMYD2	SET and zf-MYND domain-containing protein. (265 aa)
	D8UF77_VOLCA	TSPc domain-containing protein. (551 aa)
	D8UI63_VOLCA	SET domain-containing protein. (65 aa)
	D8UI64_VOLCA	CXC domain-containing protein. (510 aa)
	D8UID7_VOLCA	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (392 aa)
	D8TIY0_VOLCA	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (376 aa)
	VSET4	Histone H3 Lys 4 methyltransferase. (2171 aa)
	D8TS63_VOLCA	SET domain-containing protein. (467 aa)
	D8TTI3_VOLCA	Histone H3 lys4 methyltransferase. (118 aa)
	VASHH1	Histone H3 Lys 36 methyltransferase/ASH1. (2345 aa)
	D8TYK9_VOLCA	Uncharacterized protein. (310 aa)
	D8TYV6_VOLCA	Uncharacterized protein. (676 aa)
	D8TZE2_VOLCA	CW-type domain-containing protein. (857 aa)
	VSET3	Histone H3 methyltransferase. (653 aa)
	D8U2L9_VOLCA	Uncharacterized protein. (1446 aa)
	D8U366_VOLCA	Uncharacterized protein. (1111 aa)
	SMYD1	SET and zf-MYND domain-containing protein. (487 aa)
	VSET2	Histone H3 methyltransferase. (261 aa)
	D8TZ02_VOLCA	Uncharacterized protein. (1516 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TIY0_VOLCA	D8TYK9_VOLCA	D8TIY0	D8TYK9	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein.	0.578
D8TIY0_VOLCA	D8U2L9_VOLCA	D8TIY0	D8U2L9	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein.	0.578
D8TIY0_VOLCA	D8UID7_VOLCA	D8TIY0	D8UID7	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.549
D8TS63_VOLCA	D8TZ02_VOLCA	D8TS63	D8TZ02	SET domain-containing protein.	Uncharacterized protein.	0.917
D8TS63_VOLCA	SMYD1	D8TS63	D8U5L8	SET domain-containing protein.	SET and zf-MYND domain-containing protein.	0.402
D8TS63_VOLCA	SMYD2	D8TS63	D8UDD9	SET domain-containing protein.	SET and zf-MYND domain-containing protein.	0.900
D8TYK9_VOLCA	D8TIY0_VOLCA	D8TYK9	D8TIY0	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.578
D8TYV6_VOLCA	SMYD1	D8TYV6	D8U5L8	Uncharacterized protein.	SET and zf-MYND domain-containing protein.	0.400
D8TZ02_VOLCA	D8TS63_VOLCA	D8TZ02	D8TS63	Uncharacterized protein.	SET domain-containing protein.	0.917
D8TZ02_VOLCA	SMYD2	D8TZ02	D8UDD9	Uncharacterized protein.	SET and zf-MYND domain-containing protein.	0.923
D8U2L9_VOLCA	D8TIY0_VOLCA	D8U2L9	D8TIY0	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.578
D8UI63_VOLCA	D8UID7_VOLCA	D8UI63	D8UID7	SET domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.439
D8UI64_VOLCA	D8UID7_VOLCA	D8UI64	D8UID7	CXC domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.439
D8UID7_VOLCA	D8TIY0_VOLCA	D8UID7	D8TIY0	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.549
D8UID7_VOLCA	D8UI63_VOLCA	D8UID7	D8UI63	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	SET domain-containing protein.	0.439
D8UID7_VOLCA	D8UI64_VOLCA	D8UID7	D8UI64	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	CXC domain-containing protein.	0.439
SMYD1	D8TS63_VOLCA	D8U5L8	D8TS63	SET and zf-MYND domain-containing protein.	SET domain-containing protein.	0.402
SMYD1	D8TYV6_VOLCA	D8U5L8	D8TYV6	SET and zf-MYND domain-containing protein.	Uncharacterized protein.	0.400
SMYD2	D8TS63_VOLCA	D8UDD9	D8TS63	SET and zf-MYND domain-containing protein.	SET domain-containing protein.	0.900
SMYD2	D8TZ02_VOLCA	D8UDD9	D8TZ02	SET and zf-MYND domain-containing protein.	Uncharacterized protein.	0.923