STRINGSTRING
mrpS11 mrpS11 D8UJS3_VOLCA D8UJS3_VOLCA rpl23A rpl23A D8UIY5_VOLCA D8UIY5_VOLCA D8UII4_VOLCA D8UII4_VOLCA D8UHH8_VOLCA D8UHH8_VOLCA D8UH33_VOLCA D8UH33_VOLCA rps14 rps14 D8UEL6_VOLCA D8UEL6_VOLCA D8UDF4_VOLCA D8UDF4_VOLCA D8UBS1_VOLCA D8UBS1_VOLCA D8U9N9_VOLCA D8U9N9_VOLCA rpl6 rpl6 rpl10E rpl10E D8U5Y2_VOLCA D8U5Y2_VOLCA D8U5C4_VOLCA D8U5C4_VOLCA rps27 rps27 D8U4B1_VOLCA D8U4B1_VOLCA mrpS19 mrpS19 erg1 erg1 rps19 rps19 D8TZA8_VOLCA D8TZA8_VOLCA rps15 rps15 D8TXB0_VOLCA D8TXB0_VOLCA D8TUL8_VOLCA D8TUL8_VOLCA rpl5 rpl5 mrpS7 mrpS7 eif6A eif6A mrpL20 mrpL20 rps28 rps28 D8TNY8_VOLCA D8TNY8_VOLCA D8TMC4_VOLCA D8TMC4_VOLCA rpsA rpsA D8TKI9_VOLCA D8TKI9_VOLCA D8TK63_VOLCA D8TK63_VOLCA D8TI00_VOLCA D8TI00_VOLCA D8THU7_VOLCA D8THU7_VOLCA D8THR4_VOLCA D8THR4_VOLCA rpl20 rpl20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mrpS11Mitochondrial ribosomal protein S11. (114 aa)
D8UJS3_VOLCAUncharacterized protein. (265 aa)
rpl23AComponent of cytosolic 80S ribosome and 60S large subunit. (147 aa)
D8UIY5_VOLCAUncharacterized protein. (477 aa)
D8UII4_VOLCABrix domain-containing protein. (356 aa)
D8UHH8_VOLCA60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (321 aa)
D8UH33_VOLCAWD_REPEATS_REGION domain-containing protein. (944 aa)
rps14Component of cytosolic 80S ribosome and 40S small subunit; Belongs to the universal ribosomal protein uS11 family. (153 aa)
D8UEL6_VOLCAUncharacterized protein. (254 aa)
D8UDF4_VOLCAUncharacterized protein. (301 aa)
D8UBS1_VOLCABrix domain-containing protein. (332 aa)
D8U9N9_VOLCAUncharacterized protein. (554 aa)
rpl6Component of cytosolic 80S ribosome and 60S large subunit. (268 aa)
rpl10EComponent of cytosolic 80S ribosome and 60S large subunit. (232 aa)
D8U5Y2_VOLCAUncharacterized protein. (6439 aa)
D8U5C4_VOLCAWD_REPEATS_REGION domain-containing protein. (328 aa)
rps2740S ribosomal protein S27. (86 aa)
D8U4B1_VOLCA60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (179 aa)
mrpS19Mitochondrial ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (117 aa)
erg1Era-like protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (453 aa)
rps19Component of cytosolic 80S ribosome and 40S small subunit. (150 aa)
D8TZA8_VOLCAUncharacterized protein. (370 aa)
rps15Component of cytosolic 80S ribosome and 40S small subunit; Belongs to the universal ribosomal protein uS19 family. (144 aa)
D8TXB0_VOLCAUncharacterized protein. (264 aa)
D8TUL8_VOLCABrix domain-containing protein. (321 aa)
rpl5Component of cytosolic 80S ribosome and 60S large subunit. (293 aa)
mrpS7Mitochondrial ribosomal protein S7. (106 aa)
eif6AEukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
mrpL2050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa)
rps28Component of cytosolic 80S ribosome and 40S small subunit. (64 aa)
D8TNY8_VOLCAUncharacterized protein. (282 aa)
D8TMC4_VOLCATr-type G domain-containing protein. (1003 aa)
rpsA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (280 aa)
D8TKI9_VOLCAUncharacterized protein. (385 aa)
D8TK63_VOLCAGTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. (480 aa)
D8TI00_VOLCARibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (272 aa)
D8THU7_VOLCARRM domain-containing protein. (429 aa)
D8THR4_VOLCA50S ribosomal protein L22, chloroplast; Belongs to the universal ribosomal protein uL22 family. (177 aa)
rpl2050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (112 aa)
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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