(28 nodes) Cellular response to alcohol network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TJC0_VOLCA	Nuclear cap-binding protein subunit 2. (284 aa)
	D8ULE1_VOLCA	Uncharacterized protein. (977 aa)
	D8UJN8_VOLCA	Homeodomain protein. (421 aa)
	mapkk1	Mitogen-activated protein kinase. (327 aa)
	D8UHU8_VOLCA	Uncharacterized protein. (285 aa)
	D8UEU9_VOLCA	Uncharacterized protein. (430 aa)
	D8UEU4_VOLCA	Uncharacterized protein. (284 aa)
	D8UCH9_VOLCA	Uncharacterized protein. (626 aa)
	D8UAX5_VOLCA	Prenylcys_lyase domain-containing protein. (125 aa)
	D8UAX4_VOLCA	Prenylcys_lyase domain-containing protein. (364 aa)
	D8UA36_VOLCA	PPM-type phosphatase domain-containing protein. (1078 aa)
	D8U6Q0_VOLCA	PPM-type phosphatase domain-containing protein. (509 aa)
	D8U5Y2_VOLCA	Uncharacterized protein. (6439 aa)
	D8U2W0_VOLCA	RRM domain-containing protein. (93 aa)
	D8U2V9_VOLCA	PWI domain-containing protein. (145 aa)
	eif3H	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (336 aa)
	D8TV38_VOLCA	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1897 aa)
	D8TUC4_VOLCA	WD_REPEATS_REGION domain-containing protein. (79 aa)
	D8TRS9_VOLCA	SF1-HH domain-containing protein. (52 aa)
	D8TRS8_VOLCA	KH domain-containing protein. (136 aa)
	elg25	Acetylglucosaminyltransferase. (438 aa)
	D8TNA7_VOLCA	MIF4G_like domain-containing protein. (1203 aa)
	kdg2	Diacylglycerol kinase. (493 aa)
	D8TLJ5_VOLCA	Uncharacterized protein. (1508 aa)
	D8TL98_VOLCA	KH_dom_type_1 domain-containing protein. (126 aa)
	D8TL13_VOLCA	Uncharacterized protein. (363 aa)
	D8TKR9_VOLCA	WD_REPEATS_REGION domain-containing protein. (473 aa)
	syp6	Qc-SNARE, Tlg1/Syntaxin 6-family; Belongs to the syntaxin family. (225 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TJC0_VOLCA	D8TKR9_VOLCA	D8TJC0	D8TKR9	Nuclear cap-binding protein subunit 2.	WD_REPEATS_REGION domain-containing protein.	0.603
D8TJC0_VOLCA	D8TNA7_VOLCA	D8TJC0	D8TNA7	Nuclear cap-binding protein subunit 2.	MIF4G_like domain-containing protein.	0.999
D8TJC0_VOLCA	D8U2V9_VOLCA	D8TJC0	D8U2V9	Nuclear cap-binding protein subunit 2.	PWI domain-containing protein.	0.784
D8TJC0_VOLCA	D8U2W0_VOLCA	D8TJC0	D8U2W0	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.784
D8TKR9_VOLCA	D8TJC0_VOLCA	D8TKR9	D8TJC0	WD_REPEATS_REGION domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.603
D8TKR9_VOLCA	D8TNA7_VOLCA	D8TKR9	D8TNA7	WD_REPEATS_REGION domain-containing protein.	MIF4G_like domain-containing protein.	0.621
D8TL98_VOLCA	D8TRS9_VOLCA	D8TL98	D8TRS9	KH_dom_type_1 domain-containing protein.	SF1-HH domain-containing protein.	0.454
D8TL98_VOLCA	D8U2V9_VOLCA	D8TL98	D8U2V9	KH_dom_type_1 domain-containing protein.	PWI domain-containing protein.	0.603
D8TL98_VOLCA	D8U2W0_VOLCA	D8TL98	D8U2W0	KH_dom_type_1 domain-containing protein.	RRM domain-containing protein.	0.603
D8TLJ5_VOLCA	D8TUC4_VOLCA	D8TLJ5	D8TUC4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.982
D8TLJ5_VOLCA	D8UEU9_VOLCA	D8TLJ5	D8UEU9	Uncharacterized protein.	Uncharacterized protein.	0.983
D8TNA7_VOLCA	D8TJC0_VOLCA	D8TNA7	D8TJC0	MIF4G_like domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.999
D8TNA7_VOLCA	D8TKR9_VOLCA	D8TNA7	D8TKR9	MIF4G_like domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.621
D8TNA7_VOLCA	D8U2V9_VOLCA	D8TNA7	D8U2V9	MIF4G_like domain-containing protein.	PWI domain-containing protein.	0.792
D8TNA7_VOLCA	D8U2W0_VOLCA	D8TNA7	D8U2W0	MIF4G_like domain-containing protein.	RRM domain-containing protein.	0.792
D8TRS8_VOLCA	D8TRS9_VOLCA	D8TRS8	D8TRS9	KH domain-containing protein.	SF1-HH domain-containing protein.	0.471
D8TRS8_VOLCA	D8U2V9_VOLCA	D8TRS8	D8U2V9	KH domain-containing protein.	PWI domain-containing protein.	0.603
D8TRS8_VOLCA	D8U2W0_VOLCA	D8TRS8	D8U2W0	KH domain-containing protein.	RRM domain-containing protein.	0.603
D8TRS9_VOLCA	D8TL98_VOLCA	D8TRS9	D8TL98	SF1-HH domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.454
D8TRS9_VOLCA	D8TRS8_VOLCA	D8TRS9	D8TRS8	SF1-HH domain-containing protein.	KH domain-containing protein.	0.471