39 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (200 aa)
	rpl7	Component of cytosolic 80S ribosome and 60S large subunit. (239 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (54 aa)
	rpl5	Component of cytosolic 80S ribosome and 60S large subunit. (293 aa)
	rpl34	Component of cytosolic 80S ribosome and 60S large subunit. (117 aa)
	rpl14	Ribosomal protein L14 component of cytosolic 80S ribosome and 60S large subunit. (133 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	rpl17	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL22 family. (171 aa)
	rpl18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (182 aa)
	D8UDZ6_VOLCA	Uncharacterized protein. (909 aa)
	rpl9	Component of cytosolic 80S ribosome and 60S large subunit. (191 aa)
	rpl22	Component of cytosolic 80S ribosome and 60S large subunit. (127 aa)
	rpl23	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	rpl37A	Component of cytosolic 80S ribosome and 60S large subunit. (92 aa)
	rpl28	Component of cytosolic 80S ribosome and 60S large subunit. (125 aa)
	rpl23A	Component of cytosolic 80S ribosome and 60S large subunit. (147 aa)
	rpl36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (99 aa)
	rpl21	Component of cytosolic 80S ribosome and 60S large subunit. (163 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	rpl35	Component of cytosolic 80S ribosome and 60S large subunit. (130 aa)
	rpl32	Component of cytosolic 80S ribosome and 60S large subunit. (133 aa)
	rpl36A	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the eukaryotic ribosomal protein eL42 family. (99 aa)
	rpl39	Component of cytosolic 80S ribosome and 60S large subunit. (51 aa)
	rpl35A	Component of cytosolic 80S ribosome and 60S large subunit. (108 aa)
	rpl4	Component of cytosolic 80S ribosome and 60S large subunit. (410 aa)
	rpl18	Component of cytosolic 80S ribosome and 60S large subunit. (187 aa)
	rpl31	Component of cytosolic 80S ribosome and 60S large subunit. (116 aa)
	rpl30	Component of cytosolic 80S ribosome and 60S large subunit. (110 aa)
	rpl12	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	rpl7A	Component of cytosolic 80S ribosome and 60S large subunit. (261 aa)
	rpl26	Component of cytosolic 80S ribosome and 60S large subunit. (145 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	D8U8W3_VOLCA	TRASH domain-containing protein. (164 aa)
	rpl38	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	rpl6	Component of cytosolic 80S ribosome and 60S large subunit. (268 aa)
	rpl11	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL5 family. (179 aa)
	rpl27A	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL15 family. (147 aa)
	rpl13A	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL13 family. (185 aa)
	rpl13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (218 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8U8W3_VOLCA	D8UDZ6_VOLCA	D8U8W3	D8UDZ6	TRASH domain-containing protein.	Uncharacterized protein.	0.889
D8U8W3_VOLCA	rpl11	D8U8W3	D8U9S8	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL5 family.	0.957
D8U8W3_VOLCA	rpl12	D8U8W3	D8U4B4	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL11 family.	0.819
D8U8W3_VOLCA	rpl13	D8U8W3	D8U1M5	TRASH domain-containing protein.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.935
D8U8W3_VOLCA	rpl13A	D8U8W3	D8U3Z9	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL13 family.	0.942
D8U8W3_VOLCA	rpl14	D8U8W3	D8TTG7	TRASH domain-containing protein.	Ribosomal protein L14 component of cytosolic 80S ribosome and 60S large subunit.	0.934
D8U8W3_VOLCA	rpl15	D8U8W3	D8TJ32	TRASH domain-containing protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.937
D8U8W3_VOLCA	rpl17	D8U8W3	D8TS49	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL22 family.	0.965
D8U8W3_VOLCA	rpl18	D8U8W3	D8TPB6	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.942
D8U8W3_VOLCA	rpl18A	D8U8W3	D8TQD0	TRASH domain-containing protein.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.940
D8U8W3_VOLCA	rpl19	D8U8W3	D8TZN4	TRASH domain-containing protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.940
D8U8W3_VOLCA	rpl21	D8U8W3	D8THQ0	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.943
D8U8W3_VOLCA	rpl22	D8U8W3	D8UEC9	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.953
D8U8W3_VOLCA	rpl23	D8U8W3	D8UFS7	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL14 family.	0.771
D8U8W3_VOLCA	rpl23A	D8U8W3	D8UJA1	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.944
D8U8W3_VOLCA	rpl26	D8U8W3	D8U5Q7	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.953
D8U8W3_VOLCA	rpl27	D8U8W3	D8TTF8	TRASH domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.944
D8U8W3_VOLCA	rpl27A	D8U8W3	D8UD30	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit; Belongs to the universal ribosomal protein uL15 family.	0.926
D8U8W3_VOLCA	rpl28	D8U8W3	D8UH89	TRASH domain-containing protein.	Component of cytosolic 80S ribosome and 60S large subunit.	0.805
D8U8W3_VOLCA	rpl29	D8U8W3	D8TVB8	TRASH domain-containing protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.950