(11 nodes) HECT domain network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TMH6_VOLCA	HECT domain-containing protein. (351 aa)
	D8U6D4_VOLCA	HECT domain-containing protein. (491 aa)
	D8U7H9_VOLCA	HECT domain-containing protein. (450 aa)
	D8UCH3_VOLCA	HECT domain-containing protein. (938 aa)
	D8UGK1_VOLCA	Uncharacterized protein. (1637 aa)
	D8UIV8_VOLCA	HECT domain-containing protein. (382 aa)
	D8UJ09_VOLCA	HECT domain-containing protein. (1288 aa)
	D8U0D0_VOLCA	HECT domain-containing protein. (393 aa)
	D8U0C6_VOLCA	HECT domain-containing protein. (1318 aa)
	D8TWA2_VOLCA	HECT domain-containing protein. (371 aa)
	D8TQQ4_VOLCA	HECT domain-containing protein. (396 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TMH6_VOLCA	D8U6D4_VOLCA	D8TMH6	D8U6D4	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8TQQ4_VOLCA	D8TWA2_VOLCA	D8TQQ4	D8TWA2	HECT domain-containing protein.	HECT domain-containing protein.	0.904
D8TQQ4_VOLCA	D8U6D4_VOLCA	D8TQQ4	D8U6D4	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8TWA2_VOLCA	D8TQQ4_VOLCA	D8TWA2	D8TQQ4	HECT domain-containing protein.	HECT domain-containing protein.	0.904
D8TWA2_VOLCA	D8U6D4_VOLCA	D8TWA2	D8U6D4	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8U0C6_VOLCA	D8U6D4_VOLCA	D8U0C6	D8U6D4	HECT domain-containing protein.	HECT domain-containing protein.	0.445
D8U0D0_VOLCA	D8U6D4_VOLCA	D8U0D0	D8U6D4	HECT domain-containing protein.	HECT domain-containing protein.	0.722
D8U6D4_VOLCA	D8TMH6_VOLCA	D8U6D4	D8TMH6	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8U6D4_VOLCA	D8TQQ4_VOLCA	D8U6D4	D8TQQ4	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8U6D4_VOLCA	D8TWA2_VOLCA	D8U6D4	D8TWA2	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8U6D4_VOLCA	D8U0C6_VOLCA	D8U6D4	D8U0C6	HECT domain-containing protein.	HECT domain-containing protein.	0.445
D8U6D4_VOLCA	D8U0D0_VOLCA	D8U6D4	D8U0D0	HECT domain-containing protein.	HECT domain-containing protein.	0.722
D8U6D4_VOLCA	D8U7H9_VOLCA	D8U6D4	D8U7H9	HECT domain-containing protein.	HECT domain-containing protein.	0.722
D8U6D4_VOLCA	D8UCH3_VOLCA	D8U6D4	D8UCH3	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8U6D4_VOLCA	D8UGK1_VOLCA	D8U6D4	D8UGK1	HECT domain-containing protein.	Uncharacterized protein.	0.445
D8U6D4_VOLCA	D8UIV8_VOLCA	D8U6D4	D8UIV8	HECT domain-containing protein.	HECT domain-containing protein.	0.858
D8U6D4_VOLCA	D8UJ09_VOLCA	D8U6D4	D8UJ09	HECT domain-containing protein.	HECT domain-containing protein.	0.714
D8U7H9_VOLCA	D8U6D4_VOLCA	D8U7H9	D8U6D4	HECT domain-containing protein.	HECT domain-containing protein.	0.722
D8UCH3_VOLCA	D8U6D4_VOLCA	D8UCH3	D8U6D4	HECT domain-containing protein.	HECT domain-containing protein.	0.527
D8UGK1_VOLCA	D8U6D4_VOLCA	D8UGK1	D8U6D4	Uncharacterized protein.	HECT domain-containing protein.	0.445