STRINGSTRING
pus6 pus6 D8U1N1_VOLCA D8U1N1_VOLCA pus5 pus5 D8TUB5_VOLCA D8TUB5_VOLCA D8TVS5_VOLCA D8TVS5_VOLCA D8TZA2_VOLCA D8TZA2_VOLCA pus7 pus7 pus3 pus3 pus8 pus8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pus6Pseudouridine synthase. (367 aa)
D8U1N1_VOLCAS4 RNA-binding domain-containing protein. (381 aa)
pus5Pseudouridine synthase. (712 aa)
D8TUB5_VOLCAPseudoU_synth_2 domain-containing protein. (421 aa)
D8TVS5_VOLCAPseudoU_synth_2 domain-containing protein. (535 aa)
D8TZA2_VOLCAPseudoU_synth_2 domain-containing protein. (553 aa)
pus7Pseudouridine synthase mitochondrial. (955 aa)
pus3Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (343 aa)
pus8Pseudouridine synthase mitochondrial. (564 aa)
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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