(18 nodes) UBA-like superfamily network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TJQ6_VOLCA	CUE domain-containing protein. (1265 aa)
	D8TMG2_VOLCA	UBA domain-containing protein. (449 aa)
	D8U6Y2_VOLCA	UBA domain-containing protein. (2244 aa)
	D8U8C6_VOLCA	Uncharacterized protein. (931 aa)
	EFTS	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (979 aa)
	D8TNP4_VOLCA	Uncharacterized protein. (1058 aa)
	D8U9T0_VOLCA	UBA domain-containing protein. (465 aa)
	D8UGA5_VOLCA	Uncharacterized protein. (557 aa)
	D8TQP4_VOLCA	Uncharacterized protein. (366 aa)
	D8TS47_VOLCA	CUE domain-containing protein. (873 aa)
	D8TTA1_VOLCA	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (978 aa)
	D8UJ01_VOLCA	Uncharacterized protein. (744 aa)
	D8UA62_VOLCA	Uncharacterized protein. (464 aa)
	D8UEL7_VOLCA	UBA domain-containing protein. (260 aa)
	D8UEN2_VOLCA	CUE domain-containing protein. (356 aa)
	D8UEX6_VOLCA	UBX domain-containing protein. (516 aa)
	D8U1L2_VOLCA	Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (214 aa)
	D8U6M4_VOLCA	Uncharacterized protein. (579 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TQP4_VOLCA	D8TTA1_VOLCA	D8TQP4	D8TTA1	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.713
D8TQP4_VOLCA	D8UA62_VOLCA	D8TQP4	D8UA62	Uncharacterized protein.	Uncharacterized protein.	0.905
D8TQP4_VOLCA	D8UEL7_VOLCA	D8TQP4	D8UEL7	Uncharacterized protein.	UBA domain-containing protein.	0.875
D8TQP4_VOLCA	D8UGA5_VOLCA	D8TQP4	D8UGA5	Uncharacterized protein.	Uncharacterized protein.	0.483
D8TTA1_VOLCA	D8TQP4_VOLCA	D8TTA1	D8TQP4	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Uncharacterized protein.	0.713
D8TTA1_VOLCA	D8UA62_VOLCA	D8TTA1	D8UA62	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Uncharacterized protein.	0.612
D8U9T0_VOLCA	D8UEN2_VOLCA	D8U9T0	D8UEN2	UBA domain-containing protein.	CUE domain-containing protein.	0.443
D8U9T0_VOLCA	D8UEX6_VOLCA	D8U9T0	D8UEX6	UBA domain-containing protein.	UBX domain-containing protein.	0.718
D8UA62_VOLCA	D8TQP4_VOLCA	D8UA62	D8TQP4	Uncharacterized protein.	Uncharacterized protein.	0.905
D8UA62_VOLCA	D8TTA1_VOLCA	D8UA62	D8TTA1	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.612
D8UA62_VOLCA	D8UEL7_VOLCA	D8UA62	D8UEL7	Uncharacterized protein.	UBA domain-containing protein.	0.696
D8UA62_VOLCA	D8UEX6_VOLCA	D8UA62	D8UEX6	Uncharacterized protein.	UBX domain-containing protein.	0.496
D8UA62_VOLCA	D8UGA5_VOLCA	D8UA62	D8UGA5	Uncharacterized protein.	Uncharacterized protein.	0.642
D8UEL7_VOLCA	D8TQP4_VOLCA	D8UEL7	D8TQP4	UBA domain-containing protein.	Uncharacterized protein.	0.875
D8UEL7_VOLCA	D8UA62_VOLCA	D8UEL7	D8UA62	UBA domain-containing protein.	Uncharacterized protein.	0.696
D8UEL7_VOLCA	D8UGA5_VOLCA	D8UEL7	D8UGA5	UBA domain-containing protein.	Uncharacterized protein.	0.400
D8UEN2_VOLCA	D8U9T0_VOLCA	D8UEN2	D8U9T0	CUE domain-containing protein.	UBA domain-containing protein.	0.443
D8UEX6_VOLCA	D8U9T0_VOLCA	D8UEX6	D8U9T0	UBX domain-containing protein.	UBA domain-containing protein.	0.718
D8UEX6_VOLCA	D8UA62_VOLCA	D8UEX6	D8UA62	UBX domain-containing protein.	Uncharacterized protein.	0.496
D8UGA5_VOLCA	D8TQP4_VOLCA	D8UGA5	D8TQP4	Uncharacterized protein.	Uncharacterized protein.	0.483