(12 nodes) Ribosomal protein L2, domain 2 network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps4	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
	efp2	Uncharacterized protein efp2. (234 aa)
	rpl14	Ribosomal protein L14 component of cytosolic 80S ribosome and 60S large subunit. (133 aa)
	eif5A	Eukaryotic translation initiation factor 5A. (165 aa)
	spl4	Splicing factor-like protein. (463 aa)
	D8TWK5_VOLCA	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (339 aa)
	rpl8	Component of cytosolic 80S ribosome and 60S large subunit. (259 aa)
	prpL24	Plastid/chloroplast ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. (178 aa)
	rpl26	Component of cytosolic 80S ribosome and 60S large subunit. (145 aa)
	rpl6	Component of cytosolic 80S ribosome and 60S large subunit. (268 aa)
	D8U9U3_VOLCA	Uncharacterized protein. (2000 aa)
	mrpL2	Mitochondrial ribosomal protein L2. (356 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TWK5_VOLCA	mrpL2	D8TWK5	D8UFM3	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	Mitochondrial ribosomal protein L2.	0.885
D8TWK5_VOLCA	prpL24	D8TWK5	D8U0H3	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	Plastid/chloroplast ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.	0.911
D8TWK5_VOLCA	rpl8	D8TWK5	D8TWU1	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	Component of cytosolic 80S ribosome and 60S large subunit.	0.416
efp2	mrpL2	D8THX4	D8UFM3	Uncharacterized protein efp2.	Mitochondrial ribosomal protein L2.	0.798
efp2	prpL24	D8THX4	D8U0H3	Uncharacterized protein efp2.	Plastid/chloroplast ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.	0.775
efp2	rpl14	D8THX4	D8TTG7	Uncharacterized protein efp2.	Ribosomal protein L14 component of cytosolic 80S ribosome and 60S large subunit.	0.706
efp2	rpl26	D8THX4	D8U5Q7	Uncharacterized protein efp2.	Component of cytosolic 80S ribosome and 60S large subunit.	0.775
efp2	rpl6	D8THX4	D8U9J6	Uncharacterized protein efp2.	Component of cytosolic 80S ribosome and 60S large subunit.	0.706
efp2	rpl8	D8THX4	D8TWU1	Uncharacterized protein efp2.	Component of cytosolic 80S ribosome and 60S large subunit.	0.798
efp2	rps4	D8THX4	D8U885	Uncharacterized protein efp2.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.911
eif5A	mrpL2	D8TW02	D8UFM3	Eukaryotic translation initiation factor 5A.	Mitochondrial ribosomal protein L2.	0.798
eif5A	prpL24	D8TW02	D8U0H3	Eukaryotic translation initiation factor 5A.	Plastid/chloroplast ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.	0.775
eif5A	rpl14	D8TW02	D8TTG7	Eukaryotic translation initiation factor 5A.	Ribosomal protein L14 component of cytosolic 80S ribosome and 60S large subunit.	0.984
eif5A	rpl26	D8TW02	D8U5Q7	Eukaryotic translation initiation factor 5A.	Component of cytosolic 80S ribosome and 60S large subunit.	0.948
eif5A	rpl6	D8TW02	D8U9J6	Eukaryotic translation initiation factor 5A.	Component of cytosolic 80S ribosome and 60S large subunit.	0.976
eif5A	rpl8	D8TW02	D8TWU1	Eukaryotic translation initiation factor 5A.	Component of cytosolic 80S ribosome and 60S large subunit.	0.963
eif5A	rps4	D8TW02	D8U885	Eukaryotic translation initiation factor 5A.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.983
mrpL2	D8TWK5_VOLCA	D8UFM3	D8TWK5	Mitochondrial ribosomal protein L2.	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	0.885
mrpL2	efp2	D8UFM3	D8THX4	Mitochondrial ribosomal protein L2.	Uncharacterized protein efp2.	0.798
mrpL2	eif5A	D8UFM3	D8TW02	Mitochondrial ribosomal protein L2.	Eukaryotic translation initiation factor 5A.	0.798