9 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TKK5_VOLCA	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (564 aa)
	D8TIY0_VOLCA	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (376 aa)
	D8TK55_VOLCA	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (331 aa)
	D8TMM2_VOLCA	Uncharacterized protein. (596 aa)
	D8TWU9_VOLCA	Uncharacterized protein. (808 aa)
	D8U341_VOLCA	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (422 aa)
	D8UHM9_VOLCA	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (441 aa)
	D8UID7_VOLCA	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (392 aa)
	D8UKR1_VOLCA	TPR_REGION domain-containing protein. (1472 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TIY0_VOLCA	D8TKK5_VOLCA	D8TIY0	D8TKK5	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.407
D8TIY0_VOLCA	D8UID7_VOLCA	D8TIY0	D8UID7	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.549
D8TK55_VOLCA	D8TKK5_VOLCA	D8TK55	D8TKK5	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.407
D8TK55_VOLCA	D8UID7_VOLCA	D8TK55	D8UID7	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.530
D8TKK5_VOLCA	D8TIY0_VOLCA	D8TKK5	D8TIY0	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.407
D8TKK5_VOLCA	D8TK55_VOLCA	D8TKK5	D8TK55	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.407
D8TKK5_VOLCA	D8TMM2_VOLCA	D8TKK5	D8TMM2	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein.	0.656
D8TKK5_VOLCA	D8TWU9_VOLCA	D8TKK5	D8TWU9	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein.	0.407
D8TKK5_VOLCA	D8U341_VOLCA	D8TKK5	D8U341	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.407
D8TKK5_VOLCA	D8UHM9_VOLCA	D8TKK5	D8UHM9	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.407
D8TKK5_VOLCA	D8UID7_VOLCA	D8TKK5	D8UID7	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.543
D8TKK5_VOLCA	D8UKR1_VOLCA	D8TKK5	D8UKR1	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	TPR_REGION domain-containing protein.	0.656
D8TMM2_VOLCA	D8TKK5_VOLCA	D8TMM2	D8TKK5	Uncharacterized protein.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.656
D8TWU9_VOLCA	D8TKK5_VOLCA	D8TWU9	D8TKK5	Uncharacterized protein.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.407
D8TWU9_VOLCA	D8UID7_VOLCA	D8TWU9	D8UID7	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.530
D8U341_VOLCA	D8TKK5_VOLCA	D8U341	D8TKK5	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.407
D8U341_VOLCA	D8UID7_VOLCA	D8U341	D8UID7	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.530
D8UHM9_VOLCA	D8TKK5_VOLCA	D8UHM9	D8TKK5	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.407
D8UHM9_VOLCA	D8UID7_VOLCA	D8UHM9	D8UID7	Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.530
D8UID7_VOLCA	D8TIY0_VOLCA	D8UID7	D8TIY0	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.549