(37 nodes) Ubiquitin-like domain superfamily network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TT88_VOLCA	Ubiquitin-like domain-containing protein. (147 aa)
	ubqB	Polyubiquitin. (229 aa)
	D8U8Q9_VOLCA	Ubiquitin-like domain-containing protein. (240 aa)
	D8U8N8_VOLCA	Josephin domain-containing protein. (496 aa)
	D8U5N5_VOLCA	Uncharacterized protein. (284 aa)
	rpl40	Component of cytosolic 80S ribosome and 60S large subunit. (69 aa)
	D8U4Y7_VOLCA	Ubiquitin-like domain-containing protein. (266 aa)
	ubqA	Polyubiquitin. (305 aa)
	D8U2G3_VOLCA	Small ubiquitin-related modifier. (105 aa)
	D8U0L8_VOLCA	Ubiquitin-like domain-containing protein. (1847 aa)
	apg8	Autophagy-related protein. (141 aa)
	D8TZS9_VOLCA	UBX domain-containing protein. (399 aa)
	spl1	Splicing factor 3a, subunit 1. (898 aa)
	dnj17	Molecular chaperone. (428 aa)
	D8TTM5_VOLCA	Ubiquitin-like domain-containing protein. (110 aa)
	D8TTA0_VOLCA	UBX domain-containing protein. (602 aa)
	D8UA62_VOLCA	Uncharacterized protein. (464 aa)
	D8THB1_VOLCA	Uncharacterized protein. (304 aa)
	D8THD1_VOLCA	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (528 aa)
	D8TI24_VOLCA	Ubiquitin-like domain-containing protein. (122 aa)
	rps27A	Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit. (181 aa)
	D8TJM7_VOLCA	Ubiquitin-like domain-containing protein. (73 aa)
	D8TK39_VOLCA	Ubiquitin-like domain-containing protein. (159 aa)
	D8TK98_VOLCA	Ubiquitin-like domain-containing protein. (532 aa)
	D8TKQ1_VOLCA	UBX domain-containing protein. (418 aa)
	D8TNE8_VOLCA	Ubiquitin-like domain-containing protein. (686 aa)
	D8TQP4_VOLCA	Uncharacterized protein. (366 aa)
	D8TRT7_VOLCA	ANK_REP_REGION domain-containing protein. (2471 aa)
	D8UJR9_VOLCA	Uncharacterized protein. (304 aa)
	D8UI91_VOLCA	UBX domain-containing protein. (480 aa)
	D8UI34_VOLCA	Uncharacterized protein. (421 aa)
	D8UGA5_VOLCA	Uncharacterized protein. (557 aa)
	D8UG92_VOLCA	Uncharacterized protein. (155 aa)
	D8UEX6_VOLCA	UBX domain-containing protein. (516 aa)
	D8UEL7_VOLCA	UBA domain-containing protein. (260 aa)
	ubqC	Polyubiquitin. (153 aa)
	D8UA87_VOLCA	CAP-Gly domain-containing protein. (284 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8THD1_VOLCA	D8TQP4_VOLCA	D8THD1	D8TQP4	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Uncharacterized protein.	0.589
D8THD1_VOLCA	D8UA62_VOLCA	D8THD1	D8UA62	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Uncharacterized protein.	0.494
D8THD1_VOLCA	rpl40	D8THD1	D8U547	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Component of cytosolic 80S ribosome and 60S large subunit.	0.818
D8THD1_VOLCA	rps27A	D8THD1	D8TIC0	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit.	0.859
D8TJM7_VOLCA	D8TQP4_VOLCA	D8TJM7	D8TQP4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.496
D8TJM7_VOLCA	D8U2G3_VOLCA	D8TJM7	D8U2G3	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.423
D8TJM7_VOLCA	D8UA62_VOLCA	D8TJM7	D8UA62	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.402
D8TJM7_VOLCA	apg8	D8TJM7	D8U058	Ubiquitin-like domain-containing protein.	Autophagy-related protein.	0.485
D8TK39_VOLCA	D8TZS9_VOLCA	D8TK39	D8TZS9	Ubiquitin-like domain-containing protein.	UBX domain-containing protein.	0.613
D8TK39_VOLCA	D8UA62_VOLCA	D8TK39	D8UA62	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.513
D8TK39_VOLCA	D8UI91_VOLCA	D8TK39	D8UI91	Ubiquitin-like domain-containing protein.	UBX domain-containing protein.	0.613
D8TKQ1_VOLCA	D8TQP4_VOLCA	D8TKQ1	D8TQP4	UBX domain-containing protein.	Uncharacterized protein.	0.586
D8TKQ1_VOLCA	D8TZS9_VOLCA	D8TKQ1	D8TZS9	UBX domain-containing protein.	UBX domain-containing protein.	0.723
D8TKQ1_VOLCA	D8U2G3_VOLCA	D8TKQ1	D8U2G3	UBX domain-containing protein.	Small ubiquitin-related modifier.	0.474
D8TKQ1_VOLCA	D8U5N5_VOLCA	D8TKQ1	D8U5N5	UBX domain-containing protein.	Uncharacterized protein.	0.778
D8TKQ1_VOLCA	D8U8Q9_VOLCA	D8TKQ1	D8U8Q9	UBX domain-containing protein.	Ubiquitin-like domain-containing protein.	0.515
D8TKQ1_VOLCA	D8UA62_VOLCA	D8TKQ1	D8UA62	UBX domain-containing protein.	Uncharacterized protein.	0.572
D8TKQ1_VOLCA	D8UEX6_VOLCA	D8TKQ1	D8UEX6	UBX domain-containing protein.	UBX domain-containing protein.	0.958
D8TKQ1_VOLCA	D8UI34_VOLCA	D8TKQ1	D8UI34	UBX domain-containing protein.	Uncharacterized protein.	0.996
D8TKQ1_VOLCA	D8UI91_VOLCA	D8TKQ1	D8UI91	UBX domain-containing protein.	UBX domain-containing protein.	0.723