46 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TIW5_VOLCA	Uncharacterized protein. (981 aa)
	tubE	Epsilon tubulin; Belongs to the tubulin family. (482 aa)
	poa6	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (283 aa)
	D8TLW9_VOLCA	Uncharacterized protein. (1582 aa)
	D8TMA0_VOLCA	Uncharacterized protein. (242 aa)
	D8TP90_VOLCA	Uncharacterized protein. (116 aa)
	D8TIH4_VOLCA	Uncharacterized protein. (1240 aa)
	D8TGV7_VOLCA	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (223 aa)
	rps27A	Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit. (181 aa)
	tubA1b	Alpha tubulin; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (255 aa)
	D8ULD9_VOLCA	ANAPC5 domain-containing protein. (672 aa)
	D8UKY5_VOLCA	Uncharacterized protein. (796 aa)
	D8UJZ4_VOLCA	TPR_REGION domain-containing protein. (535 aa)
	D8UJP0_VOLCA	Serine/threonine-protein phosphatase. (165 aa)
	D8UGM3_VOLCA	TPR_REGION domain-containing protein. (536 aa)
	D8UF69_VOLCA	RING-type domain-containing protein. (87 aa)
	D8UEU8_VOLCA	Uncharacterized protein. (176 aa)
	D8UC16_VOLCA	Serine/threonine protein phosphatase 2A regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (501 aa)
	D8UBG1_VOLCA	TPR_REGION domain-containing protein. (340 aa)
	D8UAZ1_VOLCA	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1128 aa)
	espA	Separase. (2079 aa)
	D8U9U5_VOLCA	Metallophos domain-containing protein. (346 aa)
	poa4	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (252 aa)
	D8U9P9_VOLCA	Uncharacterized protein. (2023 aa)
	D8U9M3_VOLCA	Uncharacterized protein. (300 aa)
	D8U8T9_VOLCA	Uncharacterized protein. (1002 aa)
	morA	Microtubule organizing protein mora. (2098 aa)
	D8U7A8_VOLCA	Uncharacterized protein. (327 aa)
	D8U711_VOLCA	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (831 aa)
	D8U693_VOLCA	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (269 aa)
	D8U622_VOLCA	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (224 aa)
	tubB1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (443 aa)
	D8U462_VOLCA	Uncharacterized protein. (620 aa)
	D8U031_VOLCA	Uncharacterized protein. (1885 aa)
	D8U030_VOLCA	DUF3437 domain-containing protein. (279 aa)
	rpn2	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (986 aa)
	tubA2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	D8TWB0_VOLCA	Uncharacterized protein. (553 aa)
	D8TWA8_VOLCA	Uncharacterized protein. (552 aa)
	Clasp	CLIP-associating protein. (794 aa)
	D8TUE8_VOLCA	Uncharacterized protein. (319 aa)
	D8TUD3_VOLCA	CULLIN_2 domain-containing protein; Belongs to the cullin family. (615 aa)
	D8TUA3_VOLCA	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (272 aa)
	D8TQZ5_VOLCA	Uncharacterized protein. (89 aa)
	D8TQZ4_VOLCA	Uncharacterized protein. (76 aa)
	D8TPX8_VOLCA	Serine/threonine-protein phosphatase. (315 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Clasp	espA	D8TUE9	D8U9W0	CLIP-associating protein.	Separase.	0.535
D8TGV7_VOLCA	D8TMA0_VOLCA	D8TGV7	D8TMA0	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Uncharacterized protein.	0.904
D8TGV7_VOLCA	D8TP90_VOLCA	D8TGV7	D8TP90	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Uncharacterized protein.	0.768
D8TGV7_VOLCA	D8TUA3_VOLCA	D8TGV7	D8TUA3	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.992
D8TGV7_VOLCA	D8U030_VOLCA	D8TGV7	D8U030	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	DUF3437 domain-containing protein.	0.768
D8TGV7_VOLCA	D8U031_VOLCA	D8TGV7	D8U031	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Uncharacterized protein.	0.768
D8TGV7_VOLCA	D8U622_VOLCA	D8TGV7	D8U622	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.564
D8TGV7_VOLCA	D8U693_VOLCA	D8TGV7	D8U693	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.991
D8TGV7_VOLCA	D8UF69_VOLCA	D8TGV7	D8UF69	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	RING-type domain-containing protein.	0.529
D8TGV7_VOLCA	D8UJZ4_VOLCA	D8TGV7	D8UJZ4	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	TPR_REGION domain-containing protein.	0.555
D8TGV7_VOLCA	poa4	D8TGV7	D8U9R8	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.991
D8TGV7_VOLCA	poa6	D8TGV7	D8TLU2	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.991
D8TGV7_VOLCA	rpn2	D8TGV7	D8TYP3	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.959
D8TGV7_VOLCA	rps27A	D8TGV7	D8TIC0	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit.	0.887
D8TIH4_VOLCA	D8TWA8_VOLCA	D8TIH4	D8TWA8	Uncharacterized protein.	Uncharacterized protein.	0.757
D8TIH4_VOLCA	D8TWB0_VOLCA	D8TIH4	D8TWB0	Uncharacterized protein.	Uncharacterized protein.	0.757
D8TIH4_VOLCA	D8U9M3_VOLCA	D8TIH4	D8U9M3	Uncharacterized protein.	Uncharacterized protein.	0.826
D8TIH4_VOLCA	espA	D8TIH4	D8U9W0	Uncharacterized protein.	Separase.	0.639
D8TIH4_VOLCA	tubA1b	D8TIH4	D8UM23	Uncharacterized protein.	Alpha tubulin; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.711
D8TIH4_VOLCA	tubA2	D8TIH4	D8TXF3	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.711