17 items (Volvox carteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TMG5_VOLCA	Uncharacterized protein. (173 aa)
	tubA1b	Alpha tubulin; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (255 aa)
	D8UCY5_VOLCA	Uncharacterized protein. (279 aa)
	dnj28	Molecular chaperone. (1174 aa)
	D8U147_VOLCA	TPR_REGION domain-containing protein. (157 aa)
	tubA2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	dnj17	Molecular chaperone. (428 aa)
	D8TW76_VOLCA	Uncharacterized protein. (289 aa)
	D8TVY7_VOLCA	TPR_REGION domain-containing protein. (87 aa)
	D8TVY6_VOLCA	Uncharacterized protein. (131 aa)
	D8TUK4_VOLCA	Uncharacterized protein. (534 aa)
	D8TTY0_VOLCA	Uncharacterized protein. (1443 aa)
	dnj1	Molecular chaperone. (424 aa)
	D8TT44_VOLCA	Uncharacterized protein. (712 aa)
	D8TMG3_VOLCA	Uncharacterized protein. (308 aa)
	D8TLR1_VOLCA	DUF4470 domain-containing protein. (1606 aa)
	GATA	Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). (381 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TLR1_VOLCA	dnj1	D8TLR1	D8TTG2	DUF4470 domain-containing protein.	Molecular chaperone.	0.507
D8TLR1_VOLCA	dnj17	D8TLR1	D8TWW6	DUF4470 domain-containing protein.	Molecular chaperone.	0.507
D8TLR1_VOLCA	dnj28	D8TLR1	D8UAE1	DUF4470 domain-containing protein.	Molecular chaperone.	0.507
D8TUK4_VOLCA	dnj1	D8TUK4	D8TTG2	Uncharacterized protein.	Molecular chaperone.	0.507
D8TUK4_VOLCA	dnj17	D8TUK4	D8TWW6	Uncharacterized protein.	Molecular chaperone.	0.507
D8TUK4_VOLCA	dnj28	D8TUK4	D8UAE1	Uncharacterized protein.	Molecular chaperone.	0.507
D8TVY6_VOLCA	dnj1	D8TVY6	D8TTG2	Uncharacterized protein.	Molecular chaperone.	0.507
D8TVY6_VOLCA	dnj17	D8TVY6	D8TWW6	Uncharacterized protein.	Molecular chaperone.	0.507
D8TVY6_VOLCA	dnj28	D8TVY6	D8UAE1	Uncharacterized protein.	Molecular chaperone.	0.507
D8TVY7_VOLCA	dnj1	D8TVY7	D8TTG2	TPR_REGION domain-containing protein.	Molecular chaperone.	0.507
D8TVY7_VOLCA	dnj17	D8TVY7	D8TWW6	TPR_REGION domain-containing protein.	Molecular chaperone.	0.507
D8TVY7_VOLCA	dnj28	D8TVY7	D8UAE1	TPR_REGION domain-containing protein.	Molecular chaperone.	0.507
D8TW76_VOLCA	dnj1	D8TW76	D8TTG2	Uncharacterized protein.	Molecular chaperone.	0.507
D8TW76_VOLCA	dnj17	D8TW76	D8TWW6	Uncharacterized protein.	Molecular chaperone.	0.507
D8TW76_VOLCA	dnj28	D8TW76	D8UAE1	Uncharacterized protein.	Molecular chaperone.	0.507
D8U147_VOLCA	dnj1	D8U147	D8TTG2	TPR_REGION domain-containing protein.	Molecular chaperone.	0.507
D8U147_VOLCA	dnj17	D8U147	D8TWW6	TPR_REGION domain-containing protein.	Molecular chaperone.	0.507
D8U147_VOLCA	dnj28	D8U147	D8UAE1	TPR_REGION domain-containing protein.	Molecular chaperone.	0.507
D8UCY5_VOLCA	dnj1	D8UCY5	D8TTG2	Uncharacterized protein.	Molecular chaperone.	0.507
D8UCY5_VOLCA	dnj17	D8UCY5	D8TWW6	Uncharacterized protein.	Molecular chaperone.	0.507