(16 nodes) Calnexin/calreticulin cycle network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TPN4_VOLCA	Uncharacterized protein. (386 aa)
	amd1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (852 aa)
	D8UGU4_VOLCA	Uncharacterized protein. (199 aa)
	D8TQ21_VOLCA	RING-CH-type domain-containing protein. (156 aa)
	D8TQK8_VOLCA	Uncharacterized protein. (151 aa)
	rps27A	Ribosomal protein S27A component of cytosolic 80S ribosome and 40S small subunit. (181 aa)
	D8TTX5_VOLCA	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (230 aa)
	D8TV39_VOLCA	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (898 aa)
	D8TX11_VOLCA	RING-CH-type domain-containing protein. (148 aa)
	D8U3D9_VOLCA	Uncharacterized protein. (2233 aa)
	D8U5K1_VOLCA	Calreticulin. (419 aa)
	D8U652_VOLCA	RING-CH-type domain-containing protein. (117 aa)
	D8U7Q9_VOLCA	RING-CH-type domain-containing protein. (452 aa)
	D8U813_VOLCA	RING-CH-type domain-containing protein. (283 aa)
	D8UED0_VOLCA	Uncharacterized protein. (612 aa)
	D8UFU5_VOLCA	RING-CH-type domain-containing protein. (850 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TV39_VOLCA	D8U3D9_VOLCA	D8TV39	D8U3D9	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.739
D8TV39_VOLCA	D8U5K1_VOLCA	D8TV39	D8U5K1	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Calreticulin.	0.637
D8TV39_VOLCA	D8UED0_VOLCA	D8TV39	D8UED0	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	Uncharacterized protein.	0.924
D8TV39_VOLCA	amd1	D8TV39	D8UG85	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.947
D8U3D9_VOLCA	D8TV39_VOLCA	D8U3D9	D8TV39	Uncharacterized protein.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.739
D8U3D9_VOLCA	D8U5K1_VOLCA	D8U3D9	D8U5K1	Uncharacterized protein.	Calreticulin.	0.658
D8U3D9_VOLCA	D8UED0_VOLCA	D8U3D9	D8UED0	Uncharacterized protein.	Uncharacterized protein.	0.755
D8U3D9_VOLCA	amd1	D8U3D9	D8UG85	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.501
D8U5K1_VOLCA	D8TV39_VOLCA	D8U5K1	D8TV39	Calreticulin.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.637
D8U5K1_VOLCA	D8U3D9_VOLCA	D8U5K1	D8U3D9	Calreticulin.	Uncharacterized protein.	0.658
D8U5K1_VOLCA	D8UED0_VOLCA	D8U5K1	D8UED0	Calreticulin.	Uncharacterized protein.	0.956
D8U5K1_VOLCA	amd1	D8U5K1	D8UG85	Calreticulin.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.468
D8UED0_VOLCA	D8TV39_VOLCA	D8UED0	D8TV39	Uncharacterized protein.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.924
D8UED0_VOLCA	D8U3D9_VOLCA	D8UED0	D8U3D9	Uncharacterized protein.	Uncharacterized protein.	0.755
D8UED0_VOLCA	D8U5K1_VOLCA	D8UED0	D8U5K1	Uncharacterized protein.	Calreticulin.	0.956
D8UED0_VOLCA	amd1	D8UED0	D8UG85	Uncharacterized protein.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.554
amd1	D8TV39_VOLCA	D8UG85	D8TV39	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.947
amd1	D8U3D9_VOLCA	D8UG85	D8U3D9	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein.	0.501
amd1	D8U5K1_VOLCA	D8UG85	D8U5K1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Calreticulin.	0.468
amd1	D8UED0_VOLCA	D8UG85	D8UED0	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Uncharacterized protein.	0.554