STRINGSTRING
hstH3-11 hstH3-11 met1 met1 D8TIL2_VOLCA D8TIL2_VOLCA lig1 lig1 hstH3-8 hstH3-8 D8UJG6_VOLCA D8UJG6_VOLCA D8UBS3_VOLCA D8UBS3_VOLCA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hstH3-11Histone H3; Belongs to the histone H3 family. (135 aa)
met1Maintenance DNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (2277 aa)
D8TIL2_VOLCADNA_LIGASE_A3 domain-containing protein. (2638 aa)
lig1DNA ligase. (648 aa)
hstH3-8Histone H3; Belongs to the histone H3 family. (135 aa)
D8UJG6_VOLCAHistone domain-containing protein. (105 aa)
D8UBS3_VOLCAHistone domain-containing protein. (143 aa)
Your Current Organism:
Volvox carteri
NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar
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