(64 nodes) Leucine-rich repeats, outliers network (Volvox carteri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8TQC7_VOLCA	Uncharacterized protein. (836 aa)
	D8TH34_VOLCA	Uncharacterized protein. (1637 aa)
	D8TI68_VOLCA	Protein kinase domain-containing protein. (522 aa)
	D8TI71_VOLCA	Uncharacterized protein. (648 aa)
	D8TIZ9_VOLCA	Uncharacterized protein. (576 aa)
	D8TJA6_VOLCA	Uncharacterized protein. (1932 aa)
	D8TJD4_VOLCA	Uncharacterized protein. (361 aa)
	D8TK18_VOLCA	Uncharacterized protein. (352 aa)
	D8TKD1_VOLCA	Uncharacterized protein. (803 aa)
	D8TKH3_VOLCA	Uncharacterized protein. (819 aa)
	D8TL13_VOLCA	Uncharacterized protein. (363 aa)
	D8TLG2_VOLCA	Uncharacterized protein. (803 aa)
	D8TLK0_VOLCA	Uncharacterized protein. (1139 aa)
	D8TMA6_VOLCA	Uncharacterized protein. (524 aa)
	D8TN77_VOLCA	Uncharacterized protein. (393 aa)
	D8TN85_VOLCA	Uncharacterized protein. (1121 aa)
	D8TNC3_VOLCA	WD_REPEATS_REGION domain-containing protein. (1810 aa)
	D8TND7_VOLCA	Uncharacterized protein. (451 aa)
	D8TNK4_VOLCA	Uncharacterized protein. (873 aa)
	D8TP97_VOLCA	Uncharacterized protein. (606 aa)
	D8TPC3_VOLCA	Uncharacterized protein. (570 aa)
	D8TQC5_VOLCA	Uncharacterized protein. (479 aa)
	D8TQT7_VOLCA	F-box domain-containing protein. (616 aa)
	D8TR68_VOLCA	Uncharacterized protein. (680 aa)
	D8TRI9_VOLCA	Uncharacterized protein. (367 aa)
	D8TSG8_VOLCA	Uncharacterized protein. (383 aa)
	D8TTD2_VOLCA	Uncharacterized protein. (706 aa)
	D8TTE1_VOLCA	TGc domain-containing protein. (1188 aa)
	D8TTX3_VOLCA	Uncharacterized protein. (685 aa)
	D8TU00_VOLCA	Uncharacterized protein. (378 aa)
	D8TVA8_VOLCA	Uncharacterized protein. (1205 aa)
	D8TVG9_VOLCA	Uncharacterized protein. (502 aa)
	D8TW68_VOLCA	Pyridox_oxase_2 domain-containing protein. (1155 aa)
	D8TWW3_VOLCA	Uncharacterized protein. (391 aa)
	D8U001_VOLCA	Uncharacterized protein. (467 aa)
	D8U076_VOLCA	Uncharacterized protein. (1100 aa)
	D8U145_VOLCA	Uncharacterized protein. (1032 aa)
	D8U165_VOLCA	Uncharacterized protein. (666 aa)
	D8U1B3_VOLCA	LRRNT_2 domain-containing protein. (179 aa)
	D8U1Y0_VOLCA	Uncharacterized protein. (370 aa)
	D8U350_VOLCA	Aldo_ket_red domain-containing protein. (969 aa)
	D8U4A2_VOLCA	Uncharacterized protein. (224 aa)
	D8U4E9_VOLCA	Uncharacterized protein. (2001 aa)
	D8U5G2_VOLCA	Uncharacterized protein. (399 aa)
	D8U6K1_VOLCA	F-box domain-containing protein. (460 aa)
	D8U7I2_VOLCA	Uncharacterized protein. (1200 aa)
	D8U931_VOLCA	Uncharacterized protein. (202 aa)
	D8U9F7_VOLCA	Uncharacterized protein. (1149 aa)
	D8UA77_VOLCA	Uncharacterized protein. (1657 aa)
	D8UAF5_VOLCA	Uncharacterized protein. (154 aa)
	D8UCA6_VOLCA	Uncharacterized protein. (1217 aa)
	D8UCF7_VOLCA	Uncharacterized protein. (996 aa)
	D8UCP5_VOLCA	Uncharacterized protein. (2195 aa)
	D8UD27_VOLCA	Uncharacterized protein. (1035 aa)
	D8UDB9_VOLCA	Uncharacterized protein. (1226 aa)
	D8UDF5_VOLCA	Uncharacterized protein. (873 aa)
	D8UEM6_VOLCA	Uncharacterized protein. (468 aa)
	D8UG11_VOLCA	Uncharacterized protein. (324 aa)
	D8UG79_VOLCA	Uncharacterized protein. (1631 aa)
	D8UH14_VOLCA	Uncharacterized protein. (510 aa)
	D8UHA4_VOLCA	Uncharacterized protein. (581 aa)
	D8UHD2_VOLCA	Uncharacterized protein. (732 aa)
	D8UHE7_VOLCA	Uncharacterized protein. (1184 aa)
	D8UHX5_VOLCA	Uncharacterized protein. (774 aa)

Your Current Organism:

Volvox carteri

NCBI taxonomy Id: 3068
Other names: V. carteri f. nagariensis, Volvox carteri f. nagariensis, Volvox carteri f. nagariensis M.O.P.Iyengar

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8TH34_VOLCA	D8TTE1_VOLCA	D8TH34	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.853
D8TI68_VOLCA	D8TTE1_VOLCA	D8TI68	D8TTE1	Protein kinase domain-containing protein.	TGc domain-containing protein.	0.533
D8TI68_VOLCA	D8UG11_VOLCA	D8TI68	D8UG11	Protein kinase domain-containing protein.	Uncharacterized protein.	0.452
D8TKD1_VOLCA	D8TTE1_VOLCA	D8TKD1	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.529
D8TKH3_VOLCA	D8TTE1_VOLCA	D8TKH3	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TKH3_VOLCA	D8UG11_VOLCA	D8TKH3	D8UG11	Uncharacterized protein.	Uncharacterized protein.	0.470
D8TL13_VOLCA	D8TTE1_VOLCA	D8TL13	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.529
D8TLG2_VOLCA	D8TTE1_VOLCA	D8TLG2	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TLK0_VOLCA	D8TTE1_VOLCA	D8TLK0	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.529
D8TMA6_VOLCA	D8TTE1_VOLCA	D8TMA6	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.529
D8TMA6_VOLCA	D8U5G2_VOLCA	D8TMA6	D8U5G2	Uncharacterized protein.	Uncharacterized protein.	0.660
D8TND7_VOLCA	D8TTE1_VOLCA	D8TND7	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TP97_VOLCA	D8TTE1_VOLCA	D8TP97	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.853
D8TQC7_VOLCA	D8TTE1_VOLCA	D8TQC7	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TR68_VOLCA	D8TTE1_VOLCA	D8TR68	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TRI9_VOLCA	D8TTE1_VOLCA	D8TRI9	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TSG8_VOLCA	D8TTE1_VOLCA	D8TSG8	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TSG8_VOLCA	D8UG11_VOLCA	D8TSG8	D8UG11	Uncharacterized protein.	Uncharacterized protein.	0.523
D8TTD2_VOLCA	D8TTE1_VOLCA	D8TTD2	D8TTE1	Uncharacterized protein.	TGc domain-containing protein.	0.533
D8TTE1_VOLCA	D8TH34_VOLCA	D8TTE1	D8TH34	TGc domain-containing protein.	Uncharacterized protein.	0.853