(56 nodes) ABC-type transporter activity, and NodB homology domain network (Chaetomium globosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHGG_10915	Uncharacterized protein. (271 aa)
	CHGG_10713	Uncharacterized protein. (1037 aa)
	CHGG_10531	Uncharacterized protein. (156 aa)
	CHGG_10524	ABC transporter domain-containing protein. (1283 aa)
	CHGG_10109	Uncharacterized protein. (284 aa)
	CHGG_09924	Uncharacterized protein. (1440 aa)
	CHGG_09822	Uncharacterized protein. (836 aa)
	CHGG_08885	ABC transporter domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (712 aa)
	CHGG_08769	Uncharacterized protein. (358 aa)
	CHGG_08744	Uncharacterized protein. (1112 aa)
	CHGG_08738	ABC transporter domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (396 aa)
	CHGG_08539	Uncharacterized protein. (1398 aa)
	CHGG_07905	Uncharacterized protein. (1901 aa)
	CHGG_07573	Uncharacterized protein. (1479 aa)
	CHGG_07494	Uncharacterized protein. (995 aa)
	CHGG_07333	FAD-binding PCMH-type domain-containing protein. (517 aa)
	CHGG_07273	ABC transporter domain-containing protein. (203 aa)
	CHGG_07145	Uncharacterized protein. (119 aa)
	CHGG_06922	Uncharacterized protein. (340 aa)
	CHGG_04894	Uncharacterized protein. (377 aa)
	CHGG_04374	Uncharacterized protein. (1201 aa)
	CHGG_04367	AB hydrolase-1 domain-containing protein. (273 aa)
	CHGG_04077	Uncharacterized protein. (300 aa)
	CHGG_04007	Uncharacterized protein. (844 aa)
	CHGG_03994	ABC transporter domain-containing protein. (555 aa)
	CHGG_03878	INTRADIOL_DIOXYGENAS domain-containing protein. (411 aa)
	CHGG_03777	ABC transporter domain-containing protein. (617 aa)
	CHGG_06790	Uncharacterized protein. (1012 aa)
	CHGG_06781	Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1416 aa)
	CHGG_06711	Fungal_trans domain-containing protein. (720 aa)
	CHGG_06323	Uncharacterized protein. (1405 aa)
	CHGG_05924	NodB homology domain-containing protein. (171 aa)
	CHGG_05871	Uncharacterized protein. (368 aa)
	CHGG_05461	Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1377 aa)
	CHGG_05345	GGACT domain-containing protein. (213 aa)
	CHGG_05291	Uncharacterized protein. (151 aa)
	CHGG_05276	Fungal_trans domain-containing protein. (598 aa)
	CHGG_05275	Uncharacterized protein. (1179 aa)
	CHGG_03690	Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1299 aa)
	CHGG_03570	Uncharacterized protein. (361 aa)
	CHGG_03251	ABC transporter domain-containing protein. (1821 aa)
	CHGG_03223	Uncharacterized protein. (1231 aa)
	CHGG_03203	Uncharacterized protein. (1658 aa)
	CHGG_03169	Uncharacterized protein. (172 aa)
	CHGG_02903	Uncharacterized protein. (572 aa)
	CHGG_02416	NodB homology domain-containing protein. (177 aa)
	CHGG_02140	INTRADIOL_DIOXYGENAS domain-containing protein. (379 aa)
	CHGG_02103	Uncharacterized protein. (420 aa)
	CHGG_02062	Uncharacterized protein. (890 aa)
	CHGG_01785	Uncharacterized protein. (1566 aa)
	CHGG_01623	Uncharacterized protein. (1032 aa)
	CHGG_01358	Uncharacterized protein. (1036 aa)
	CHGG_01225	Uncharacterized protein. (146 aa)
	CHGG_00998	Aldo_ket_red domain-containing protein. (333 aa)
	CHGG_00752	Uncharacterized protein. (1597 aa)
	ATM1	Iron-sulfur clusters transporter ATM1, mitochondrial; Performs an essential function in the generation of cytoplasmic iron-sulfur proteins by mediating the ATP-dependent export of Fe/S cluster precursors synthesized by NFS1 and other mitochondrial proteins. Hydrolyzes ATP. Binds glutathione and may function by transporting a glutathione-conjugated iron-sulfur compound (By similarity). (603 aa)

Your Current Organism:

Chaetomium globosum

NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATM1	CHGG_07273	Q2HIE9	Q2GXN1	Iron-sulfur clusters transporter ATM1, mitochondrial; Performs an essential function in the generation of cytoplasmic iron-sulfur proteins by mediating the ATP-dependent export of Fe/S cluster precursors synthesized by NFS1 and other mitochondrial proteins. Hydrolyzes ATP. Binds glutathione and may function by transporting a glutathione-conjugated iron-sulfur compound (By similarity).	ABC transporter domain-containing protein.	0.768
CHGG_00998	CHGG_06711	Q2HFK6	Q2H3Q4	Aldo_ket_red domain-containing protein.	Fungal_trans domain-containing protein.	0.402
CHGG_01358	CHGG_03777	Q2HEJ6	Q2H369	Uncharacterized protein.	ABC transporter domain-containing protein.	0.445
CHGG_01623	CHGG_05275	Q2HDT1	Q2H7U0	Uncharacterized protein.	Uncharacterized protein.	0.430
CHGG_03169	CHGG_08738	Q2H9D5	Q2GTG6	Uncharacterized protein.	ABC transporter domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.707
CHGG_03203	CHGG_07145	Q2H9A1	Q2GY09	Uncharacterized protein.	Uncharacterized protein.	0.817
CHGG_03777	CHGG_01358	Q2H369	Q2HEJ6	ABC transporter domain-containing protein.	Uncharacterized protein.	0.445
CHGG_03777	CHGG_03994	Q2H369	Q2H2K2	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.442
CHGG_03994	CHGG_03777	Q2H2K2	Q2H369	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.442
CHGG_05275	CHGG_01623	Q2H7U0	Q2HDT1	Uncharacterized protein.	Uncharacterized protein.	0.430
CHGG_05461	CHGG_08738	Q2H7A4	Q2GTG6	Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	ABC transporter domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.807
CHGG_06711	CHGG_00998	Q2H3Q4	Q2HFK6	Fungal_trans domain-containing protein.	Aldo_ket_red domain-containing protein.	0.402
CHGG_07145	CHGG_03203	Q2GY09	Q2H9A1	Uncharacterized protein.	Uncharacterized protein.	0.817
CHGG_07273	ATM1	Q2GXN1	Q2HIE9	ABC transporter domain-containing protein.	Iron-sulfur clusters transporter ATM1, mitochondrial; Performs an essential function in the generation of cytoplasmic iron-sulfur proteins by mediating the ATP-dependent export of Fe/S cluster precursors synthesized by NFS1 and other mitochondrial proteins. Hydrolyzes ATP. Binds glutathione and may function by transporting a glutathione-conjugated iron-sulfur compound (By similarity).	0.768
CHGG_07273	CHGG_09822	Q2GXN1	Q2GQD2	ABC transporter domain-containing protein.	Uncharacterized protein.	0.541
CHGG_08738	CHGG_03169	Q2GTG6	Q2H9D5	ABC transporter domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	Uncharacterized protein.	0.707
CHGG_08738	CHGG_05461	Q2GTG6	Q2H7A4	ABC transporter domain-containing protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.	0.807
CHGG_09822	CHGG_07273	Q2GQD2	Q2GXN1	Uncharacterized protein.	ABC transporter domain-containing protein.	0.541