(12 nodes) Mixed, incl. Signaling by Hippo, and Bfa1-Bub2 complex network (Chaetomium globosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHGG_10231	Uncharacterized protein. (997 aa)
	CHGG_10214	Uncharacterized protein. (219 aa)
	CHGG_08224	Uncharacterized protein. (1827 aa)
	CHGG_07697	Uncharacterized protein. (222 aa)
	CHGG_07180	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (269 aa)
	CHGG_06482	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (428 aa)
	CHGG_06481	AGC-kinase C-terminal domain-containing protein. (132 aa)
	CHGG_02658	Protein kinase domain-containing protein. (1440 aa)
	CHGG_01879	Rab-GAP TBC domain-containing protein. (488 aa)
	CHGG_01587	Uncharacterized protein. (349 aa)
	CHGG_01025	Uncharacterized protein. (346 aa)
	CHGG_00571	Uncharacterized protein. (282 aa)

Your Current Organism:

Chaetomium globosum

NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHGG_00571	CHGG_02658	Q2HGT3	Q2HAU6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.527
CHGG_00571	CHGG_07697	Q2HGT3	Q2GWF7	Uncharacterized protein.	Uncharacterized protein.	0.507
CHGG_00571	CHGG_08224	Q2HGT3	Q2GUY0	Uncharacterized protein.	Uncharacterized protein.	0.502
CHGG_00571	CHGG_10214	Q2HGT3	Q2GP90	Uncharacterized protein.	Uncharacterized protein.	0.470
CHGG_01025	CHGG_06481	Q2HFH9	Q2H4D4	Uncharacterized protein.	AGC-kinase C-terminal domain-containing protein.	0.571
CHGG_01025	CHGG_06482	Q2HFH9	Q2H4D3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.571
CHGG_01025	CHGG_07180	Q2HFH9	Q2GXX4	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.881
CHGG_01025	CHGG_10214	Q2HFH9	Q2GP90	Uncharacterized protein.	Uncharacterized protein.	0.467
CHGG_01587	CHGG_06481	Q2HDW7	Q2H4D4	Uncharacterized protein.	AGC-kinase C-terminal domain-containing protein.	0.571
CHGG_01587	CHGG_06482	Q2HDW7	Q2H4D3	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.571
CHGG_01587	CHGG_07180	Q2HDW7	Q2GXX4	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.881
CHGG_01587	CHGG_10214	Q2HDW7	Q2GP90	Uncharacterized protein.	Uncharacterized protein.	0.467
CHGG_01879	CHGG_02658	Q2HD25	Q2HAU6	Rab-GAP TBC domain-containing protein.	Protein kinase domain-containing protein.	0.988
CHGG_01879	CHGG_06481	Q2HD25	Q2H4D4	Rab-GAP TBC domain-containing protein.	AGC-kinase C-terminal domain-containing protein.	0.420
CHGG_01879	CHGG_06482	Q2HD25	Q2H4D3	Rab-GAP TBC domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.420
CHGG_01879	CHGG_07697	Q2HD25	Q2GWF7	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.998
CHGG_01879	CHGG_08224	Q2HD25	Q2GUY0	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.870
CHGG_01879	CHGG_10214	Q2HD25	Q2GP90	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.600
CHGG_01879	CHGG_10231	Q2HD25	Q2GP73	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.968
CHGG_02658	CHGG_00571	Q2HAU6	Q2HGT3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.527