(18 nodes) L-amino acid transport network (Chaetomium globosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHGG_02184	Helo_like_N domain-containing protein. (745 aa)
	CHGG_01442	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)
	CHGG_10387	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (1169 aa)
	CHGG_09655	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)
	CHGG_08380	Uncharacterized protein. (490 aa)
	CHGG_07626	Aa_trans domain-containing protein. (497 aa)
	CHGG_07442	Amino acid transporter. (471 aa)
	CHGG_07226	Aa_trans domain-containing protein. (742 aa)
	CHGG_07086	Uncharacterized protein. (1857 aa)
	CHGG_06914	Aa_trans domain-containing protein. (462 aa)
	CHGG_04186	Aa_trans domain-containing protein. (491 aa)
	CHGG_06773	Aa_trans domain-containing protein. (500 aa)
	CHGG_06339	Uncharacterized protein. (236 aa)
	CHGG_05907	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the mitochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (333 aa)
	CHGG_05835	Uncharacterized protein. (286 aa)
	CHGG_05834	Uncharacterized protein. (228 aa)
	CHGG_02674	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (698 aa)
	CHGG_02672	Uncharacterized protein. (278 aa)

Your Current Organism:

Chaetomium globosum

NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHGG_02674	CHGG_06773	Q2HAT0	Q2H3J2	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Aa_trans domain-containing protein.	0.404
CHGG_05834	CHGG_05835	Q2H681	Q2H680	Uncharacterized protein.	Uncharacterized protein.	0.899
CHGG_05835	CHGG_05834	Q2H680	Q2H681	Uncharacterized protein.	Uncharacterized protein.	0.899
CHGG_06773	CHGG_02674	Q2H3J2	Q2HAT0	Aa_trans domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.404
CHGG_07226	CHGG_08380	Q2GXS8	Q2GUH4	Aa_trans domain-containing protein.	Uncharacterized protein.	0.819
CHGG_08380	CHGG_07226	Q2GUH4	Q2GXS8	Uncharacterized protein.	Aa_trans domain-containing protein.	0.819