(35 nodes) Intrinsic component of mitochondrial inner membrane network (Chaetomium globosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	YME2	Mitochondrial escape protein 2; Plays a role in maintaining the mitochondrial genome and in controlling the mtDNA escape. Involved in the regulation of mtDNA nucleotide structure and number. May have a dispensable role in early maturation of pre-rRNA (By similarity); Belongs to the YME2 family. (831 aa)
	CHGG_08359	Uncharacterized protein. (480 aa)
	CHGG_08969	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (640 aa)
	CHGG_09319	Lactamase_B domain-containing protein. (83 aa)
	CHGG_09330	Mitochondrial import inner membrane translocase subunit tim-17. (151 aa)
	CHGG_09612	Uncharacterized protein. (198 aa)
	CHGG_09644	Uncharacterized protein. (596 aa)
	CHGG_10274	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (309 aa)
	CHGG_10326	Amino_oxidase domain-containing protein. (514 aa)
	CHGG_10327	Uncharacterized protein. (200 aa)
	CHGG_07594	Uncharacterized protein. (494 aa)
	CHGG_07515	Uncharacterized protein. (600 aa)
	CHGG_07312	Uncharacterized protein. (475 aa)
	CHGG_04377	Lactamase_B domain-containing protein. (399 aa)
	CHGG_03819	Uncharacterized protein. (291 aa)
	CHGG_06406	Uncharacterized protein. (137 aa)
	CHGG_06294	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (153 aa)
	CHGG_06276	Uncharacterized protein. (92 aa)
	CHGG_06011	Uncharacterized protein. (207 aa)
	CHGG_05701	Uncharacterized protein. (430 aa)
	CHGG_03664	Uncharacterized protein. (783 aa)
	CHGG_03390	Uncharacterized protein. (337 aa)
	CHGG_03324	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (90 aa)
	CHGG_03045	Uncharacterized protein. (97 aa)
	CHGG_02961	Uncharacterized protein. (242 aa)
	CHGG_02565	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (882 aa)
	CHGG_02418	AAA domain-containing protein. (753 aa)
	CHGG_02159	MCU domain-containing protein. (1432 aa)
	CHGG_02024	Uncharacterized protein; Belongs to the BI1 family. (341 aa)
	CHGG_01660	HIG1 domain-containing protein. (234 aa)
	CHGG_01128	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (381 aa)
	CHGG_01048	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (386 aa)
	CHGG_00987	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (175 aa)
	CHGG_00864	Uncharacterized protein. (810 aa)
	CHGG_00665	MICOS complex subunit MIC12; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. (321 aa)

Your Current Organism:

Chaetomium globosum

NCBI taxonomy Id: 306901
Other names: C. globosum CBS 148.51, Chaetomium globosum CBS 148.51

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHGG_00665	CHGG_00987	Q2HGI9	Q2HFL7	MICOS complex subunit MIC12; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.400
CHGG_00864	CHGG_03324	Q2HFZ0	Q2H8Y0	Uncharacterized protein.	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.416
CHGG_00987	CHGG_00665	Q2HFL7	Q2HGI9	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC12; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.400
CHGG_00987	CHGG_03324	Q2HFL7	Q2H8Y0	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.891
CHGG_01128	CHGG_06294	Q2HF76	Q2H4X1	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.955
CHGG_02159	CHGG_02418	Q2HC95	Q2HBI6	MCU domain-containing protein.	AAA domain-containing protein.	0.654
CHGG_02159	CHGG_02961	Q2HC95	Q2H9Z3	MCU domain-containing protein.	Uncharacterized protein.	0.450
CHGG_02159	CHGG_10327	Q2HC95	Q2GNX7	MCU domain-containing protein.	Uncharacterized protein.	0.536
CHGG_02418	CHGG_02159	Q2HBI6	Q2HC95	AAA domain-containing protein.	MCU domain-containing protein.	0.654
CHGG_02418	CHGG_09330	Q2HBI6	Q2GRS4	AAA domain-containing protein.	Mitochondrial import inner membrane translocase subunit tim-17.	0.464
CHGG_02565	CHGG_07594	Q2HB39	Q2GWR0	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein.	0.654
CHGG_02961	CHGG_02159	Q2H9Z3	Q2HC95	Uncharacterized protein.	MCU domain-containing protein.	0.450
CHGG_02961	CHGG_07594	Q2H9Z3	Q2GWR0	Uncharacterized protein.	Uncharacterized protein.	0.503
CHGG_02961	CHGG_09330	Q2H9Z3	Q2GRS4	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit tim-17.	0.994
CHGG_02961	CHGG_09612	Q2H9Z3	Q2GQZ2	Uncharacterized protein.	Uncharacterized protein.	0.972
CHGG_02961	CHGG_10327	Q2H9Z3	Q2GNX7	Uncharacterized protein.	Uncharacterized protein.	0.500
CHGG_03324	CHGG_00864	Q2H8Y0	Q2HFZ0	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Uncharacterized protein.	0.416
CHGG_03324	CHGG_00987	Q2H8Y0	Q2HFL7	MICOS complex subunit MIC10; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.891
CHGG_06294	CHGG_01128	Q2H4X1	Q2HF76	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.955
CHGG_07312	CHGG_07515	Q2GXJ2	Q2GWY9	Uncharacterized protein.	Uncharacterized protein.	0.614